STRINGSTRING
Bd0520 Bd0520 apr apr Bd0523 Bd0523 Bd0524 Bd0524 Bd0629 Bd0629 Bd0816 Bd0816 Bd0976 Bd0976 Bd0977 Bd0977 Bd1399 Bd1399 Bd1670 Bd1670 Bd1672 Bd1672 Bd1673 Bd1673 Bd2332 Bd2332 Bd2333 Bd2333 Bd2334 Bd2334 spb1 spb1 Bd3575 Bd3575
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bd0520Hypothetical protein predicted by Glimmer/Critica. (151 aa)
aprInterPro: Serine proteases subtilase family, Alkaline protease; hypothetical protein. (734 aa)
Bd0523Hypothetical protein predicted by Glimmer/Critica. (529 aa)
Bd0524Hypothetical protein predicted by Glimmer/Critica; Possible Proteophosphoglycan precursor, Ppg3; hypothetical protein. (461 aa)
Bd0629Trypsin; InterPro: Serine proteases trypsin family; hypothetical protein. (265 aa)
Bd0816D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); hypothetical protein. (436 aa)
Bd0976Superfamily II DNA/RNA helicases, SNF2 family; hypothetical protein. (165 aa)
Bd0977DUF2183 domain-containing protein; Unnamed protein product; hypothetical protein. (262 aa)
Bd1399Hypothetical protein predicted by Glimmer/Critica. (185 aa)
Bd1670Phosphoglycerol transferase; Putative sulfatase; hypothetical protein. (609 aa)
Bd1672Putative N-acetylglucosaminyltransferase. (275 aa)
Bd1673Putative cyclic beta-1,2-glucan modification protein. (557 aa)
Bd2332InterPro: Serine proteases trypsin family; hypothetical protein. (313 aa)
Bd2333Hypothetical protein predicted by Glimmer/Critica. (130 aa)
Bd2334InterPro: Serine proteases trypsin family; hypothetical protein. (295 aa)
spb1InterPro: Serine proteases subtilase family,; hypothetical protein. (526 aa)
Bd3575Putative soluble lytic murein transglycosylase. (540 aa)
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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