STRINGSTRING
Bd0688 Bd0688 prc prc frpA frpA Bd1114 Bd1114 Bd1115 Bd1115 Bd1237 Bd1237 Bd1238 Bd1238 ctpA-2 ctpA-2 Bd1240 Bd1240 Bd1242 Bd1242 Bd1243 Bd1243 Bd2524 Bd2524 Bd2525 Bd2525 Bd2526 Bd2526 Bd2545 Bd2545 Bd2546 Bd2546 Bd2547 Bd2547 Bd3099 Bd3099 Bd3100 Bd3100 Bd3101 Bd3101
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bd0688Putative hemagglutinin/hemolysin-related protein; CDS. (1067 aa)
prcInterPro: Carboxyl-terminal protease, Tail-specific protease precursor (Protease Re) (PRCprotein) (C-terminal processing peptidase); hypothetical protein; Belongs to the peptidase S41A family. (673 aa)
frpAIron-regulated protein frpA. (634 aa)
Bd1114Hypothetical protein predicted by Glimmer/Critica. (94 aa)
Bd1115Hypothetical protein predicted by Glimmer/Critica. (71 aa)
Bd1237(P54535) Probable amino-acid ABC transporter extracellular binding protein yqiXprecursor; hypothetical protein. (245 aa)
Bd1238Hypothetical protein predicted by Glimmer/Critica; Putative Sigma 54 dependent transcriptional activator; hypothetical protein. (144 aa)
ctpA-2Carboxy-terminal processing protease; InterPro: Tail specific protease; hypothetical protein. (401 aa)
Bd1240Hypothetical protein predicted by Glimmer/Critica. (205 aa)
Bd1242COG1714 Predicted membrane protein/domain; hypothetical protein. (408 aa)
Bd1243Putative integral membrane protein; InterPro: Rhomboid family; hypothetical protein. (312 aa)
Bd2524Hypothetical protein predicted by Glimmer/Critica. (225 aa)
Bd2525Hypothetical protein predicted by Glimmer/Critica. (399 aa)
Bd2526Hypothetical protein predicted by Glimmer/Critica. (210 aa)
Bd2545Subtilisin-like serine proteases; hypothetical protein; Belongs to the peptidase S8 family. (628 aa)
Bd2546Protein of unknown function with DUF502 domain; hypothetical protein. (232 aa)
Bd2547Hypothetical protein predicted by Glimmer/Critica. (468 aa)
Bd3099Hypothetical protein predicted by Glimmer/Critica. (328 aa)
Bd3100Hypothetical protein predicted by Glimmer/Critica. (275 aa)
Bd3101Putative transcriptional regulator; InterPro: Response regulator receiver domain; hypothetical protein. (313 aa)
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.