STRINGSTRING
mrcB mrcB mrcA mrcA pbpC pbpC Bd2460 Bd2460 Bd3212 Bd3212 pbpB pbpB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mrcBPenicillin-binding protein 1B; InterPro: Penicillin binding protein transpeptidase domain; hypothetical protein. (790 aa)
mrcAPenicillin-binding protein 1A; InterPro: Penicillin binding protein transpeptidase domain, ponA, penicillin-binding protein 1A [EC: 3.4.-.-]; hypothetical protein. (898 aa)
pbpCBifunctional penicillin-binding protein; InterPro: Penicillin binding protein transpeptidase domain; hypothetical protein. (672 aa)
Bd2460InterPro: Penicillin binding protein transpeptidase domain, COG0768 Cell division protein FtsI/penicillin-binding protein 2; hypothetical protein. (661 aa)
Bd3212Beta-lactamase, putative; hypothetical protein. (294 aa)
pbpBInterPro: Penicillin binding protein transpeptidase domain; hypothetical protein. (444 aa)
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.