STRINGSTRING
A0A443HLW3 A0A443HLW3 A0A443HLB8 A0A443HLB8 A0A443HLA5 A0A443HLA5 A0A443HL23 A0A443HL23 A0A443HKM8 A0A443HKM8 A0A443HK47 A0A443HK47 A0A443HJR8 A0A443HJR8 A0A443HJK0 A0A443HJK0 A0A443HJH6 A0A443HJH6 A0A443HJD5 A0A443HJD5 A0A443HJ73 A0A443HJ73 A0A443HJ29 A0A443HJ29 A0A443HIX0 A0A443HIX0 LSM8 LSM8 A0A443HIA9 A0A443HIA9 A0A443HI07 A0A443HI07 A0A443HHP2 A0A443HHP2 A0A443HHL5 A0A443HHL5 A0A443HM79 A0A443HM79 A0A443HML4 A0A443HML4 A0A443HMN8 A0A443HMN8 A0A443HMP6 A0A443HMP6 A0A443HMY5 A0A443HMY5 A0A443HN03 A0A443HN03 A0A443HPE5 A0A443HPE5 A0A443HPF1 A0A443HPF1 A0A443HPJ2 A0A443HPJ2 A0A443HPL2 A0A443HPL2 A0A443HPS1 A0A443HPS1 A0A443HQA6 A0A443HQA6 A0A443HQB5 A0A443HQB5 A0A443HQG8 A0A443HQG8 A0A443HR06 A0A443HR06 A0A443HRR0 A0A443HRR0 A0A443HRU9 A0A443HRU9 A0A443HRV1 A0A443HRV1 A0A443HS41 A0A443HS41 A0A443HS42 A0A443HS42 A0A443HS98 A0A443HS98 A0A443HSF0 A0A443HSF0 A0A443HSG2 A0A443HSG2 A0A443HSL7 A0A443HSL7 A0A443HSM4 A0A443HSM4 A0A443HSW1 A0A443HSW1 A0A443HT67 A0A443HT67 A0A443HT78 A0A443HT78 A0A443HTU7 A0A443HTU7 A0A443HV32 A0A443HV32 A0A443HV82 A0A443HV82 A0A443HVJ9 A0A443HVJ9 A0A443HVY9 A0A443HVY9 A0A443HW52 A0A443HW52 A0A443HWF8 A0A443HWF8 A0A443HWG3 A0A443HWG3 A0A443HX22 A0A443HX22 A0A443HXM1 A0A443HXM1 A0A443HXQ1 A0A443HXQ1 A0A443HY09 A0A443HY09 A0A443HY83 A0A443HY83 A0A443HY97 A0A443HY97 A0A443HYH4 A0A443HYH4 A0A443HZ23 A0A443HZ23 A0A443HZ52 A0A443HZ52 A0A443HZP5 A0A443HZP5 A0A443HZX9 A0A443HZX9 A0A443I0C8 A0A443I0C8 A0A443I0V5 A0A443I0V5 A0A443I0X6 A0A443I0X6 A0A443I0Y2 A0A443I0Y2 A0A443I1F0 A0A443I1F0 A0A443I1G9 A0A443I1G9 A0A443I1Q7 A0A443I1Q7 A0A443I1T6 A0A443I1T6 A0A443I208 A0A443I208 A0A443I229 A0A443I229 A0A443I243 A0A443I243 LSM4 LSM4 A0A443I2H1 A0A443I2H1 A0A443I2K8 A0A443I2K8 A0A443I2Q9 A0A443I2Q9 A0A443I2W6 A0A443I2W6 A0A443I357 A0A443I357 A0A443I3C0 A0A443I3C0 LSM5 LSM5 A0A443I3Y8 A0A443I3Y8 A0A443I423 A0A443I423 A0A443I4F0 A0A443I4F0 A0A443I4F5 A0A443I4F5 A0A443I4G1 A0A443I4G1 A0A443I519 A0A443I519 A0A443I5W2 A0A443I5W2 A0A443I638 A0A443I638 A0A443I6B3 A0A443I6B3 A0A443I6H7 A0A443I6H7 LSM3 LSM3 A0A443I6N5 A0A443I6N5 A0A443I6X2 A0A443I6X2 A0A443I7G6 A0A443I7G6 A0A443I7I7 A0A443I7I7 A0A443I7K9 A0A443I7K9 A0A443I7P3 A0A443I7P3 A0A443I7V8 A0A443I7V8 A0A443I827 A0A443I827 A0A443I831 A0A443I831 A0A443I839 A0A443I839 A0A443I8X2 A0A443I8X2 A0A443HLN4 A0A443HLN4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A443HLW3Splicing factor 3b subunit 4. (354 aa)
A0A443HLB8Pre-mRNA-splicing factor rse1. (1267 aa)
A0A443HLA5NRDE-2, necessary for RNA interference-domain-containing protein. (1166 aa)
A0A443HL23Nuclear protein DGCR14. (463 aa)
A0A443HKM8Putative RNA binding protein. (248 aa)
A0A443HK47Putative C2H2 finger domain protein. (219 aa)
A0A443HJR8Concanavalin A-like lectin/glucanase domain-containing protein. (396 aa)
A0A443HJK0mRNA splicing protein Yju2. (274 aa)
A0A443HJH6Matrin-type domain-containing protein. (501 aa)
A0A443HJD5Putative R3H domain protein. (595 aa)
A0A443HJ73Putative peptidyl-prolyl cis-trans isomerase. (570 aa)
A0A443HJ29Splicing factor 3b. (563 aa)
A0A443HIX0Putative U5 snRNP complex subunit. (360 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A443HIA9CwfJ C-terminus 1-domain-containing protein-like protein. (554 aa)
A0A443HI07Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
A0A443HHP2PRP1 splicing factor, N-terminal-domain-containing protein. (939 aa)
A0A443HHL5Putative pre-mRNA branch site protein p14. (102 aa)
A0A443HM79Pre-mRNA-splicing factor cwc21. (231 aa)
A0A443HML4DUF1716 domain protein. (592 aa)
A0A443HMN8Uncharacterized protein. (209 aa)
A0A443HMP6Putative GTP-binding protein EsdC. (260 aa)
A0A443HMY5SYF2 splicing factor-domain-containing protein. (293 aa)
A0A443HN03U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (209 aa)
A0A443HPE5Putative cell cycle control protein. (677 aa)
A0A443HPF1Pre-mRNA splicing factor. (520 aa)
A0A443HPJ2Uncharacterized protein. (786 aa)
A0A443HPL2Pre-mRNA-processing ATP-dependent RNA helicase prp5. (1176 aa)
A0A443HPS1mRNA splicing factor RNA helicase. (840 aa)
A0A443HQA6Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
A0A443HQB5Putative ATP dependent RNA helicase. (442 aa)
A0A443HQG8WW domain binding protein 11-domain-containing protein. (292 aa)
A0A443HR06Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1416 aa)
A0A443HRR0Putative G-patch domain protein. (775 aa)
A0A443HRU9Uncharacterized protein. (759 aa)
A0A443HRV1CwfJ C-terminus 1-domain-containing protein-like protein. (700 aa)
A0A443HS41Pinin/SDK/memA domain protein. (319 aa)
A0A443HS42Putative Pre-mRNA splicing factor ini1. (108 aa)
A0A443HS98Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (213 aa)
A0A443HSF0Small nuclear ribonucleoprotein Sm D2. (114 aa)
A0A443HSG2Pre-mRNA splicing factor component-domain-containing protein. (790 aa)
A0A443HSL7Putative microfibrillar-associated protein MfaP1. (504 aa)
A0A443HSM4Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
A0A443HSW1MI domain-containing protein. (902 aa)
A0A443HT67Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A0A443HT78U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (547 aa)
A0A443HTU7Putative splicing factor 3B subunit 1. (1244 aa)
A0A443HV32Putative nuclear mRNA splicing factor-associated protein. (402 aa)
A0A443HV82Pleiotropic regulator 1. (453 aa)
A0A443HVJ9Putative mRNA splicing protein. (594 aa)
A0A443HVY9Uncharacterized protein. (337 aa)
A0A443HW52Isy1-like splicing factor. (253 aa)
A0A443HWF8RNA binding domain-containing protein. (292 aa)
A0A443HWG3Putative Pre-mRNA-splicing factor cwc24. (345 aa)
A0A443HX22Putative pre-mRNA splicing helicase. (2215 aa)
A0A443HXM1Nuclear cap-binding protein subunit 2. (178 aa)
A0A443HXQ1Pre-mRNA-splicing factor Cwf15/Cwc15. (228 aa)
A0A443HY09Small nuclear ribonucleo protein. (136 aa)
A0A443HY83Putative pre-RNA splicing factor Slt11. (382 aa)
A0A443HY97Putative RNA splicing factor (Pad-1). (573 aa)
A0A443HYH4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
A0A443HZ23Pre-mRNA-splicing factor of RES complex-domain-containing protein. (340 aa)
A0A443HZ52FRG1-like family protein. (289 aa)
A0A443HZP5U5 small nuclear ribonucleo protein component. (983 aa)
A0A443HZX9Putative G-patch DNA repair protein. (531 aa)
A0A443I0C8BCAS2 family protein. (219 aa)
A0A443I0V5Tudor domain-containing protein. (297 aa)
A0A443I0X6Putative U1 snRNP splicing complex subunit. (283 aa)
A0A443I0Y2FF domain protein. (573 aa)
A0A443I1F0Small nuclear ribonucleo protein U2, A. (250 aa)
A0A443I1G9Putative RNA helicase-like splicing factor. (1231 aa)
A0A443I1Q7Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16. (720 aa)
A0A443I1T6Pre-mRNA-splicing factor syf1. (847 aa)
A0A443I208Putative peptidyl prolyl cis-trans isomerase cyclophilin. (153 aa)
A0A443I229Uncharacterized protein. (574 aa)
A0A443I243Mitotic checkpoint regulator, MAD2B-interacting-domain-containing protein. (422 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (121 aa)
A0A443I2H1Sm domain-containing protein. (223 aa)
A0A443I2K8Putative G-patch domain protein. (534 aa)
A0A443I2Q9RRM domain-containing protein. (192 aa)
A0A443I2W6Putative mRNA splicing factor. (578 aa)
A0A443I357Cactin. (546 aa)
A0A443I3C0Putative pre-mRNA splicing factor. (2354 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
A0A443I3Y8Putative peptidyl-prolyl cis-trans isomerase. (630 aa)
A0A443I423Sm domain-containing protein. (117 aa)
A0A443I4F0mRNA splicing protein. (474 aa)
A0A443I4F5Pre-mRNA splicing factor PRP21 like protein-domain-containing protein. (572 aa)
A0A443I4G1Pre-mRNA splicing factor-domain-containing protein. (410 aa)
A0A443I519Putative PWI domain mRNA processing protein. (552 aa)
A0A443I5W2U1 zinc finger domain protein. (287 aa)
A0A443I638Putative splicing factor 3a subunit 2. (236 aa)
A0A443I6B3Putative cell cycle control protein Cwf14/Bud31. (148 aa)
A0A443I6H7Cwf18 pre-mRNA splicing factor-domain-containing protein. (203 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
A0A443I6N5CWC16 protein. (362 aa)
A0A443I6X2J domain-containing protein. (436 aa)
A0A443I7G6Uncharacterized protein. (359 aa)
A0A443I7I7U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A443I7K9WD domain, G-beta repeat protein. (1628 aa)
A0A443I7P3Small nuclear ribonucleoprotein G. (78 aa)
A0A443I7V8U1 small nuclear ribonucleo protein 70 kDa. (398 aa)
A0A443I827WD40-repeat-containing domain protein. (513 aa)
A0A443I831Putative transcriptional regulator Cwf13/SkiP. (582 aa)
A0A443I839WD domain protein. (333 aa)
A0A443I8X2Putative cell cycle control protein. (406 aa)
A0A443HLN4Uncharacterized protein. (483 aa)
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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