STRINGSTRING
A0A443I0Y2 A0A443I0Y2 A0A443HI07 A0A443HI07 A0A443HMP6 A0A443HMP6 A0A443HN03 A0A443HN03 A0A443HPJ2 A0A443HPJ2 A0A443HRU9 A0A443HRU9 A0A443HSF0 A0A443HSF0 A0A443HSM4 A0A443HSM4 A0A443HVJ9 A0A443HVJ9 A0A443I0X6 A0A443I0X6 A0A443I7P3 A0A443I7P3 A0A443I7V8 A0A443I7V8 A0A443I7K9 A0A443I7K9 A0A443I2H1 A0A443I2H1 A0A443I1Q0 A0A443I1Q0
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A443I0Y2FF domain protein. (573 aa)
A0A443HI07Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
A0A443HMP6Putative GTP-binding protein EsdC. (260 aa)
A0A443HN03U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (209 aa)
A0A443HPJ2Uncharacterized protein. (786 aa)
A0A443HRU9Uncharacterized protein. (759 aa)
A0A443HSF0Small nuclear ribonucleoprotein Sm D2. (114 aa)
A0A443HSM4Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
A0A443HVJ9Putative mRNA splicing protein. (594 aa)
A0A443I0X6Putative U1 snRNP splicing complex subunit. (283 aa)
A0A443I7P3Small nuclear ribonucleoprotein G. (78 aa)
A0A443I7V8U1 small nuclear ribonucleo protein 70 kDa. (398 aa)
A0A443I7K9WD domain, G-beta repeat protein. (1628 aa)
A0A443I2H1Sm domain-containing protein. (223 aa)
A0A443I1Q0U1 small nuclear ribonucleo protein usp102. (252 aa)
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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