STRINGSTRING
A0A443HIK2 A0A443HIK2 A0A443I814 A0A443I814 A0A443I6N2 A0A443I6N2 NTH1 NTH1 A0A443I3K6 A0A443I3K6 A0A443I2P7 A0A443I2P7 A0A443I1X4 A0A443I1X4 A0A443I1N2 A0A443I1N2 A0A443I0Z4 A0A443I0Z4 A0A443I0T7 A0A443I0T7 A0A443I0N3 A0A443I0N3 A0A443HZN8 A0A443HZN8 A0A443HXT9 A0A443HXT9 A0A443HXI3 A0A443HXI3 A0A443HX86 A0A443HX86 A0A443HWK7 A0A443HWK7 A0A443HUT6 A0A443HUT6 A0A443HTL1 A0A443HTL1 A0A443HT80 A0A443HT80 A0A443HSP9 A0A443HSP9 A0A443HSI5 A0A443HSI5 A0A443HRU1 A0A443HRU1 A0A443HR55 A0A443HR55 A0A443HR28 A0A443HR28 A0A443HQV8 A0A443HQV8 A0A443HQQ1 A0A443HQQ1 A0A443HPV3 A0A443HPV3 A0A443HPU7 A0A443HPU7 A0A443HMT4 A0A443HMT4 A0A443HMS0 A0A443HMS0 A0A443HLY2 A0A443HLY2 A0A443HKZ8 A0A443HKZ8 A0A443HK22 A0A443HK22 A0A443HJW3 A0A443HJW3 A0A443HJH9 A0A443HJH9 A0A443HIX5 A0A443HIX5 A0A443HII4 A0A443HII4 A0A443HI13 A0A443HI13
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A443HIK2Replication factor-a protein. (274 aa)
A0A443I814RNA polymerase II transcription initiation. (828 aa)
A0A443I6N2Putative DNA repair protein Rad4. (996 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (966 aa)
A0A443I3K6WD repeat protein. (490 aa)
A0A443I2P7P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family. (393 aa)
A0A443I1X4CDK-activating kinase assembly factor MAT1. (380 aa)
A0A443I1N2TFIIH subunit Tfb4/p34. (383 aa)
A0A443I0Z4DNA polymerase. (1106 aa)
A0A443I0T7Putative DNA repair protein Rex1. (72 aa)
A0A443I0N3DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2235 aa)
A0A443HZN8Mating-type switching protein Swi10. (327 aa)
A0A443HXT9DNA ligase. (892 aa)
A0A443HXI3DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (129 aa)
A0A443HX86CUE domain-containing protein. (872 aa)
A0A443HWK7RNA polymerase II transcription elongation factor Rtf1p. (626 aa)
A0A443HUT6Putative ATP-dependent RNA helicase. (1200 aa)
A0A443HTL1Putative DNA excision repair protein. (1004 aa)
A0A443HT808-oxoguanine DNA glycosylase. (437 aa)
A0A443HSP9Putative C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (2097 aa)
A0A443HSI5Cullin-4B; Belongs to the cullin family. (2541 aa)
A0A443HRU1Putative RNA polymerase II transcription factor-related protein. (634 aa)
A0A443HR5526S proteasome subunit P45 family protein; Belongs to the AAA ATPase family. (389 aa)
A0A443HR28RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (489 aa)
A0A443HQV8DNA excision repair protein Rad2. (1150 aa)
A0A443HQQ1Checkpoint protein; Belongs to the HUS1 family. (356 aa)
A0A443HPV3Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (605 aa)
A0A443HPU7RNA annealing protein Yra1. (255 aa)
A0A443HMT4Leucine rich repeat protein. (642 aa)
A0A443HMS0DNA repair protein RAD16. (968 aa)
A0A443HLY2Putative DNA repair protein RAD1. (973 aa)
A0A443HKZ8Putative UV excision repair protein. (377 aa)
A0A443HK22Putative TFIIH complex helicase Rad3. (795 aa)
A0A443HJW3UV-endonuclease UvdE-domain-containing protein. (555 aa)
A0A443HJH9ATP dependent DNA ligase domain protein. (1116 aa)
A0A443HIX5General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (442 aa)
A0A443HII4SNF2 family N-terminal domain-containing protein. (1213 aa)
A0A443HI13Rad4 family protein. (886 aa)
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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