STRINGSTRING
Bxe_A0543 Bxe_A0543 Bxe_A0544 Bxe_A0544 Bxe_A0545 Bxe_A0545 Bxe_A0656 Bxe_A0656 Bxe_A3357 Bxe_A3357 Bxe_A4404 Bxe_A4404 Bxe_A4448 Bxe_A4448 Bxe_B0539 Bxe_B0539 Bxe_B1801 Bxe_B1801 Bxe_B1802 Bxe_B1802 Bxe_B1897 Bxe_B1897 Bxe_B2960 Bxe_B2960 Bxe_B2961 Bxe_B2961
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bxe_A05432-keto-3-deoxygalactonate kinase. (354 aa)
Bxe_A05442-keto-3-deoxy-phosphogalactonate aldolase. (226 aa)
Bxe_A0545Putative short-chain dehydrogenase/reductase, FabG-like protein. (258 aa)
Bxe_A0656Galactonate dehydratase. (382 aa)
Bxe_A3357Putative mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (388 aa)
Bxe_A44042-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family. (260 aa)
Bxe_A4448Altronate dehydratase. (508 aa)
Bxe_B0539D-glucarate dehydratase. (449 aa)
Bxe_B1801Galactarate dehydratase. (529 aa)
Bxe_B18025-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. (305 aa)
Bxe_B1897Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (399 aa)
Bxe_B2960Altronate dehydratase. (450 aa)
Bxe_B2961Putative hydrolase. (111 aa)
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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