STRINGSTRING
Bxe_A0685 Bxe_A0685 Bxe_A1565 Bxe_A1565 Bxe_A2894 Bxe_A2894 Bxe_A4097 Bxe_A4097 Bxe_A4409 Bxe_A4409 Bxe_A4410 Bxe_A4410 Bxe_A4411 Bxe_A4411 Bxe_B1228 Bxe_B1228 Bxe_B2747 Bxe_B2747 Bxe_C0106 Bxe_C0106 Bxe_C0328 Bxe_C0328
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bxe_A0685Conserved hypothetical protein. (64 aa)
Bxe_A1565Conserved hypothetical protein. (372 aa)
Bxe_A2894Outer membrane porin, OmpC family. (387 aa)
Bxe_A4097Outer membrane porin, OmpC family. (389 aa)
Bxe_A4409Two component transcriptional regulator, Fis family. (229 aa)
Bxe_A4410Multi-sensor signal transduction histidine kinase. (800 aa)
Bxe_A4411Putative exported protein. (199 aa)
Bxe_B1228Outer membrane porin, OmpC family. (387 aa)
Bxe_B2747Outer membrane porin, OmpC family. (378 aa)
Bxe_C0106Outer membrane porin, OmpC family. (398 aa)
Bxe_C0328Outer membrane porin, OmpC family. (380 aa)
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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