STRINGSTRING
Bxe_A2780 Bxe_A2780 Bxe_A2782 Bxe_A2782 Bxe_A2783 Bxe_A2783 Bxe_A2784 Bxe_A2784 Bxe_A2785 Bxe_A2785
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bxe_A2780Hypothetical secreted protein. (138 aa)
Bxe_A2782Putative lipoprotein; Similar to surface antigen LipA. (163 aa)
Bxe_A2783Putative transmembrane transcriptional regulator(anti-sigma factor) protein, PrtR; Citation: Matsui,H., Sano,Y., Ishihara,H. andShinomiya,T. Regulation of pyocin genes in Pseudomonasaeruginosa by positive (prtN) and negative (prtR)regulatory genes. J. Bacteriol. 175 (5), 1257-1263 (1993). (283 aa)
Bxe_A2784Sigma-24 (FecI); Belongs to the sigma-70 factor family. ECF subfamily. (176 aa)
Bxe_A2785Hypothetical protein. (96 aa)
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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