STRINGSTRING
rsmG rsmG Bxe_A0122 Bxe_A0122 Bxe_A0203 Bxe_A0203 Bxe_A0224 Bxe_A0224 Bxe_A0419 Bxe_A0419 Bxe_A0423 Bxe_A0423 prmC prmC rsmH rsmH prmA prmA speE speE Bxe_A0740 Bxe_A0740 Bxe_A0810 Bxe_A0810 trmB trmB Bxe_A0944 Bxe_A0944 ubiG ubiG Bxe_A1203 Bxe_A1203 Bxe_A1222 Bxe_A1222 Bxe_A1233 Bxe_A1233 Bxe_A1252 Bxe_A1252 rlmE rlmE Bxe_A1386 Bxe_A1386 Bxe_A1436 Bxe_A1436 Bxe_A1584 Bxe_A1584 prmB prmB Bxe_A1773 Bxe_A1773 Bxe_A2028 Bxe_A2028 Bxe_A2131 Bxe_A2131 Bxe_A2203 Bxe_A2203 rlmD rlmD pcm pcm Bxe_A2515 Bxe_A2515 Bxe_A3033 Bxe_A3033 Bxe_A3043 Bxe_A3043 rlmJ rlmJ Bxe_A3323 Bxe_A3323 Bxe_A3349 Bxe_A3349 Bxe_A3354 Bxe_A3354 Bxe_A3413 Bxe_A3413 Bxe_A3431 Bxe_A3431 Bxe_A3677 Bxe_A3677 Bxe_A3768 Bxe_A3768 Bxe_A3775 Bxe_A3775 Bxe_A3792 Bxe_A3792 Bxe_A3797 Bxe_A3797 Bxe_A4003 Bxe_A4003 rsmA rsmA Bxe_A4046 Bxe_A4046 ubiE ubiE Bxe_A4139 Bxe_A4139 bioC bioC Bxe_A4376 Bxe_A4376 Bxe_A4389 Bxe_A4389 Bxe_A4412 Bxe_A4412 mnmC mnmC Bxe_B0024 Bxe_B0024 Bxe_B0199 Bxe_B0199 Bxe_B0200 Bxe_B0200 Bxe_B0296 Bxe_B0296 Bxe_B0330 Bxe_B0330 Bxe_B0334 Bxe_B0334 Bxe_B0336 Bxe_B0336 Bxe_B0340 Bxe_B0340 Bxe_B0652 Bxe_B0652 Bxe_B1217 Bxe_B1217 Bxe_B1246 Bxe_B1246 Bxe_B1520 Bxe_B1520 Bxe_B2211 Bxe_B2211 Bxe_B2693 Bxe_B2693 Bxe_B2880 Bxe_B2880 Bxe_C0022 Bxe_C0022 Bxe_C0180 Bxe_C0180 Bxe_C0463 Bxe_C0463 Bxe_C0521 Bxe_C0521 pcm-2 pcm-2 pcm-3 pcm-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rsmG16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (227 aa)
Bxe_A0122MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (316 aa)
Bxe_A0203Conserved hypothetical protein. (396 aa)
Bxe_A0224Type I restriction-modification system, M subunit. (519 aa)
Bxe_A0419Conserved hypothetical protein. (374 aa)
Bxe_A0423Conserved hypothetical protein. (280 aa)
prmC[protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (286 aa)
rsmHS-adenosyl-methyltransferase, cell division cytoplasmic protein, MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (317 aa)
prmA[LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (300 aa)
speESpermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. (293 aa)
Bxe_A0740Cyclopropane-fatty-acyl-phospholipid synthase. (404 aa)
Bxe_A0810NOL1/NOP2/Sun family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (419 aa)
trmBtRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (277 aa)
Bxe_A0944Conserved hypothetical protein. (242 aa)
ubiG3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. (232 aa)
Bxe_A1203Conserved hypothetical, plasmid-related protein. (369 aa)
Bxe_A1222C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (533 aa)
Bxe_A1233Hypothetical protein. (438 aa)
Bxe_A1252Conserved hypothetical protein. (289 aa)
rlmE23S rRNA Um-2552 2'-O-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. (220 aa)
Bxe_A1386Putative O-methyltransferase. (238 aa)
Bxe_A1436Conserved hypothetical protein. (294 aa)
Bxe_A1584Conserved hypothetical protein. (199 aa)
prmB[LSU ribosomal protein L3P]-glutamine N5-methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily. (294 aa)
Bxe_A1773Hypothetical protein. (186 aa)
Bxe_A2028Putative methyltransferase protein. (201 aa)
Bxe_A2131Putative spermine/spermidine synthase family transmembrane protein. (830 aa)
Bxe_A2203Trans-aconitate 2-methyltransferase. (258 aa)
rlmD23S rRNA m(5)U-1939 methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. (434 aa)
pcmProtein-L-isoaspartate(D-aspartate) O- methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (319 aa)
Bxe_A2515Putative SAM-dependent methyltransferase, SmtA. (277 aa)
Bxe_A3033Hypothetical protein. (302 aa)
Bxe_A3043Hypothetical protein. (297 aa)
rlmJPutative protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA. (281 aa)
Bxe_A3323Conserved hypothetical protein. (310 aa)
Bxe_A3349Hypothetical protein. (336 aa)
Bxe_A3354C-5 cytosine-specific DNA methylase. (418 aa)
Bxe_A3413Putative methyltransferase. (250 aa)
Bxe_A3431Cyclopropane-fatty-acyl-phospholipid synthase. (403 aa)
Bxe_A3677Protein-L-isoaspartate(D-aspartate)O- methyltransferase. (217 aa)
Bxe_A3768Hypothetical protein. (267 aa)
Bxe_A3775Hypothetical protein. (300 aa)
Bxe_A3792Hypothetical protein. (275 aa)
Bxe_A3797Hypothetical protein. (1444 aa)
Bxe_A4003Conserved hypothetical protein; Belongs to the methyltransferase superfamily. (430 aa)
rsmADimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (277 aa)
Bxe_A4046Conserved hypothetical protein. (207 aa)
ubiE2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (243 aa)
Bxe_A4139Conserved hypothetical protein 95. (204 aa)
bioCConserved hypothetical protein; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. (338 aa)
Bxe_A437623S rRNA m(5)C-1962 methyltransferase / SAM-dependent methyltransferase. (400 aa)
Bxe_A4389Conserved hypothetical protein. (202 aa)
Bxe_A4412Fmu, rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. (457 aa)
mnmCConserved hypothetical protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family. (656 aa)
Bxe_B0024Conserved hypothetical protein. (326 aa)
Bxe_B0199Putative cyclopropane-fatty-acyl- phospholipid synthase. (369 aa)
Bxe_B0200Hypothetical protein. (311 aa)
Bxe_B0296Conserved hypothetical protein. (283 aa)
Bxe_B0330Putative spermidine synthase. (277 aa)
Bxe_B0334Putative spermidine synthase. (257 aa)
Bxe_B0336Putative spermidine synthase. (274 aa)
Bxe_B0340Putative O-methyltransferase. (286 aa)
Bxe_B0652Putative glycosyl transferase. (1119 aa)
Bxe_B1217MCP methyltransferase, CheR-type. (281 aa)
Bxe_B1246precorrin-6Y C5,15-methyltransferase (decarboxylating). (465 aa)
Bxe_B1520Signal transduction histidine kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (1303 aa)
Bxe_B2211Conserved hypothetical protein. (210 aa)
Bxe_B2693Regulatory protein. (468 aa)
Bxe_B2880Putative modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (301 aa)
Bxe_C0022Conserved hypothetical protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (286 aa)
Bxe_C0180Putative acyl transferase. (275 aa)
Bxe_C0463Putative N6 adenine-specific DNA methyltransferase, D12 class. (263 aa)
Bxe_C0521Multi sensor hybrid histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (1344 aa)
pcm-2Protein-L-isoaspartate (D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (684 aa)
pcm-3Protein-L-isoaspartate(D-aspartate)O- methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (245 aa)
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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