(53 nodes) Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily network (Paraburkholderia xenovorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Bxe_A3904	Putative glutaryl-CoA dehydrogenase. (396 aa)
	Bxe_A1000	Putative acyl-CoA dehydrogenase. (596 aa)
	Bxe_A1389	acyl-CoA dehydrogenase. (376 aa)
	Bxe_A1390	Putative acyl-CoA dehydrogenase. (416 aa)
	Bxe_A2526	Putative acyl-CoA dehydrogenase. (425 aa)
	Bxe_A2768	Putative acyl-CoA dehydrogenase, long- chain specific. (391 aa)
	Bxe_A2774	Putative transmembrane acyl-CoA dehydrogenase. (832 aa)
	Bxe_A3188	Putative acyl-CoA dehydrogenase oxidoreductase. (419 aa)
	Bxe_A3191	Putative pimeloyl-CoA dehydrogenase (small subunit), PimD-like protein; Citation: Larimer,F.W., Chain,P., Hauser,L., et al.Nat. Biotechnol. 22 (1), 55-61 (2004). (375 aa)
	Bxe_A3192	Putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like protein. (398 aa)
	Bxe_A3574	Putative acyl-CoA dehydrogenase. (377 aa)
	Bxe_A4038	Putative acyl-CoA dehydrogenase oxidoreductase. (595 aa)
	Bxe_A4085	Putative acyl-CoA dehydrogenase. (387 aa)
	Bxe_A4257	Putative acyl-CoA dehydrogenase. (376 aa)
	Bxe_B0278	Putative acyl-CoA dehydrogenase. (402 aa)
	Bxe_B0379	Putative acyl-CoA dehydrogenase. (595 aa)
	Bxe_B0855	Putative monooxygenase. (400 aa)
	Bxe_B0960	isovaleryl-CoA dehydrogenase. (393 aa)
	Bxe_B1084	Butyryl-CoA dehydrogenase. (377 aa)
	Bxe_B1358	Conserved hypothetical protein. (434 aa)
	Bxe_B1538	Putative acyl-CoA dehydrogenase. (367 aa)
	Bxe_B1544	Conserved hypothetical protein. (420 aa)
	Bxe_B1545	Conserved hypothetical protein. (416 aa)
	Bxe_B1567	Putative acyl-CoA dehydrogenase. (405 aa)
	Bxe_B1901	Putative acyl-CoA dehydrogenase. (388 aa)
	Bxe_B2308	Conserved hypothetical protein. (405 aa)
	Bxe_B2584	Putative acyl-CoA dehydrogenase. (387 aa)
	Bxe_B2635	Putative Acyl-CoA dehydrogenase. (404 aa)
	Bxe_B2724	Putative acyl-CoA dehydrogenase. (379 aa)
	Bxe_B2736	Acyl-CoA dehydrogenase. (333 aa)
	Bxe_B2737	Putative acyl-CoA dehydrogenase. (385 aa)
	Bxe_B2741	Putative acyl-CoA dehydrogenase. (379 aa)
	Bxe_C0102	Putative acyl-CoA dehydrogenase. (367 aa)
	Bxe_C0109	Putative acyl-CoA dehydrogenase. (410 aa)
	Bxe_C0137	Conserved hypothetical protein. (405 aa)
	Bxe_C0207	Putative acyl-CoA dehydrogenase. (387 aa)
	Bxe_C0208	Putative acyl-CoA dehydrogenase. (337 aa)
	Bxe_C0247	Acyl-CoA dehydrogenase. (378 aa)
	Bxe_C0279	Long-chain acyl-CoA dehydrogenase. (380 aa)
	Bxe_C0420	Putative acyl-CoA dehydrogenase. (366 aa)
	Bxe_C0426	Putative acyl-CoA dehydrogenase. (436 aa)
	Bxe_C0513	Putative acyl-CoA dehydrogenase. (387 aa)
	Bxe_C0602	Putative acyl-CoA dehydrogenase. (374 aa)
	Bxe_C0604	Putative acyl-CoA dehydrogenase. (357 aa)
	Bxe_C0605	Putative acyl-CoA dehydrogenase; Citation: J. Bacteriol. 186:3631-3639(2004). (382 aa)
	Bxe_C0617	Putative acyl-CoA dehydrogenase. (429 aa)
	Bxe_C0655	Putative acyl-CoA dehydrogenase. (386 aa)
	Bxe_C0701	Putative acyl-CoA dehydrogenase. (397 aa)
	Bxe_C0702	Putative acyl-CoA dehydrogenase. (384 aa)
	Bxe_C0833	Putative acyl-CoA dehydrogenase. (385 aa)
	Bxe_C0852	Putative acyl-CoA dehydrogenase. (390 aa)
	Bxe_C0984	Conserved hypothetical protein. (408 aa)
	Bxe_C1247	Putative monooxygenase. (394 aa)

Your Current Organism:

Paraburkholderia xenovorans

NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Bxe_A1000	Bxe_A1389	Putative acyl-CoA dehydrogenase.	acyl-CoA dehydrogenase.	0.459
Bxe_A1000	Bxe_A3191	Putative acyl-CoA dehydrogenase.	Putative pimeloyl-CoA dehydrogenase (small subunit), PimD-like protein; Citation: Larimer,F.W., Chain,P., Hauser,L., et al.Nat. Biotechnol. 22 (1), 55-61 (2004).	0.431
Bxe_A1000	Bxe_C0702	Putative acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.443
Bxe_A1389	Bxe_A1000	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.459
Bxe_A1389	Bxe_A1390	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.978
Bxe_A1389	Bxe_A2768	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase, long- chain specific.	0.414
Bxe_A1389	Bxe_A3192	acyl-CoA dehydrogenase.	Putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like protein.	0.924
Bxe_A1389	Bxe_A3574	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.425
Bxe_A1389	Bxe_A3904	acyl-CoA dehydrogenase.	Putative glutaryl-CoA dehydrogenase.	0.454
Bxe_A1389	Bxe_A4085	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.421
Bxe_A1389	Bxe_A4257	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.418
Bxe_A1389	Bxe_B0278	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.415
Bxe_A1389	Bxe_B0379	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.460
Bxe_A1389	Bxe_B1084	acyl-CoA dehydrogenase.	Butyryl-CoA dehydrogenase.	0.425
Bxe_A1389	Bxe_B1901	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.416
Bxe_A1389	Bxe_B2584	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.404
Bxe_A1389	Bxe_B2724	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.428
Bxe_A1389	Bxe_B2741	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.427
Bxe_A1389	Bxe_C0207	acyl-CoA dehydrogenase.	Putative acyl-CoA dehydrogenase.	0.870
Bxe_A1389	Bxe_C0247	acyl-CoA dehydrogenase.	Acyl-CoA dehydrogenase.	0.422

page 1 of 28

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Databases

Fusion

Experiments

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About