STRINGSTRING
Bxe_A0030 Bxe_A0030 Bxe_A0578 Bxe_A0578 Bxe_A0914 Bxe_A0914 Bxe_A1224 Bxe_A1224 Bxe_A1230 Bxe_A1230 dnaQ dnaQ rnhA rnhA ligA ligA rnhB rnhB Bxe_A1749 Bxe_A1749 Bxe_A1752 Bxe_A1752 Bxe_A2041 Bxe_A2041 Bxe_A2262 Bxe_A2262 Bxe_A2280 Bxe_A2280 Bxe_A2291 Bxe_A2291 Bxe_A2361 Bxe_A2361 Bxe_A2452 Bxe_A2452 Bxe_A2479 Bxe_A2479 Bxe_A2659 Bxe_A2659 Bxe_A2664 Bxe_A2664 Bxe_A3008 Bxe_A3008 dnaE2 dnaE2 Bxe_A3292 Bxe_A3292 Bxe_A3436 Bxe_A3436 Bxe_A3490 Bxe_A3490 Bxe_A3637 Bxe_A3637 Bxe_A3653 Bxe_A3653 surA surA Bxe_A4106 Bxe_A4106 Bxe_A4313 Bxe_A4313 Bxe_A4318 Bxe_A4318 Bxe_A4461 Bxe_A4461 Bxe_B0154 Bxe_B0154 Bxe_B0474 Bxe_B0474 Bxe_B0484 Bxe_B0484 Bxe_B0929 Bxe_B0929 Bxe_B1314 Bxe_B1314 Bxe_B1315 Bxe_B1315 Bxe_B1450 Bxe_B1450 Bxe_B2039 Bxe_B2039 Bxe_B2609 Bxe_B2609 Bxe_B2633 Bxe_B2633 dnaG dnaG polA polA Bxe_B3017 Bxe_B3017 Bxe_B3028 Bxe_B3028 Bxe_C0445 Bxe_C0445 Bxe_C0446 Bxe_C0446 Bxe_C1369 Bxe_C1369
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bxe_A0030Chromosome segregation ATPase. (263 aa)
Bxe_A0578DNA polymerase III, delta subunit. (372 aa)
Bxe_A0914DNA polymerase III, epsilon subunit. (395 aa)
Bxe_A1224Putative single-stranded DNA binding protein. (146 aa)
Bxe_A1230Putative chromosome partitioning protein ParA. (291 aa)
dnaQDNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (244 aa)
rnhARNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (148 aa)
ligANAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. (688 aa)
rnhBRNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (248 aa)
Bxe_A1749Conserved hypothetical protein. (136 aa)
Bxe_A1752Hypothetical protein. (191 aa)
Bxe_A2041Putative chromosome partitioning protein ParA, ATPase. (254 aa)
Bxe_A2262DNA polymerase III, delta prime subunit. (344 aa)
Bxe_A2280Putative peptidyl-prolyl cis-trans isomerase. (259 aa)
Bxe_A2291Putative PpiC-type peptidyl-prolyl cis- trans isomerase. (645 aa)
Bxe_A2361DNA-directed DNA polymerase. (957 aa)
Bxe_A2452Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (461 aa)
Bxe_A2479Putative cytoplasmic protein. (92 aa)
Bxe_A2659Hypothetical protein. (191 aa)
Bxe_A2664Conserved hypothetical protein. (143 aa)
Bxe_A3008Hypothetical protein. (105 aa)
dnaE2DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1195 aa)
Bxe_A3292DNA polymerase III, alpha subunit. (1193 aa)
Bxe_A3436Recombination protein MgsA. (437 aa)
Bxe_A3490Putative ParA family ATPase. (212 aa)
Bxe_A3637Putative DNA polymerase III chi subunit. (138 aa)
Bxe_A3653Hypothetical protein. (387 aa)
surAPutative peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (453 aa)
Bxe_A4106Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. (177 aa)
Bxe_A4313Protein of unknown function UPF0102; Belongs to the UPF0102 family. (140 aa)
Bxe_A4318Conserved hypothetical protein. (209 aa)
Bxe_A4461DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (367 aa)
Bxe_B0154Putative PpiC-type peptidyl-prolyl cis-trans isomerase. (313 aa)
Bxe_B0474Putative peptidyl-prolyl isomerase. (250 aa)
Bxe_B0484RAD55. (491 aa)
Bxe_B0929DNA damage-inducible DNA polymerase II. (816 aa)
Bxe_B1314Putative exonuclease involved in mRNA processing. (383 aa)
Bxe_B1315DNA ligase (ATP). (558 aa)
Bxe_B1450Conserved hypothetical protein. (126 aa)
Bxe_B2039Hypothetical protein. (262 aa)
Bxe_B2609Conserved hypothetical protein; Weak similarity to circadian clock proteins ofCyanobacteria. (505 aa)
Bxe_B2633ATPase. (340 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (622 aa)
polADNA polymerase A; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (913 aa)
Bxe_B3017Conserved hypothetical protein. (159 aa)
Bxe_B3028Plasmid segregation oscillating ATPase ParF. (220 aa)
Bxe_C0445Hypothetical protein. (286 aa)
Bxe_C0446Hypothetical protein. (192 aa)
Bxe_C1369Putative ParA-like partition protein. (347 aa)
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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