STRINGSTRING
Meso_0591 Meso_0591 Meso_0592 Meso_0592 Meso_0593 Meso_0593 Meso_0594 Meso_0594 Meso_2644 Meso_2644
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0591TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: atc:AGR_L_1106 sarcosine oxidase beta subunit. (417 aa)
Meso_0592TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; KEGG: atc:AGR_L_1105 sarcosine oxidase, subunit delta. (100 aa)
Meso_0593TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase) FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: atc:AGR_L_1103 sarcosine oxidase alpha subunit. (997 aa)
Meso_0594PFAM: Sarcosine oxidase, gamma subunit; KEGG: atc:AGR_L_1101 sarcosine oxidase gamma subunit. (182 aa)
Meso_2644PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc03200 putative amino acid deaminase transmembrane protein. (396 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.