STRINGSTRING
Meso_1836 Meso_1836 Meso_1837 Meso_1837 Meso_1838 Meso_1838 Meso_1839 Meso_1839 Meso_3636 Meso_3636 Meso_3637 Meso_3637 Meso_3638 Meso_3638 Meso_3639 Meso_3639
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_1836PFAM: Endoribonuclease L-PSP; KEGG: bja:bll7189 hypothetical protein. (116 aa)
Meso_1837BFD-like (2Fe-2S)-binding region; PFAM: HI0933-like protein FAD dependent oxidoreductase BFD-like [2Fe-2S]-binding region FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbr:BB0992 probable pyridine nucleotide-disulphide oxidoreductase. (461 aa)
Meso_1838KEGG: bja:bsl7192 putative sarcosine oxidase alpha subunit. (99 aa)
Meso_1839PFAM: FAD dependent oxidoreductase; KEGG: bbr:BB0994 probable FAD dependent oxidoreductase. (376 aa)
Meso_3636PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll7022 sarcosine oxidase, subunit beta. (394 aa)
Meso_3637PFAM: BFD-like [2Fe-2S]-binding region FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nar:Saro_2940 BFD-like (2Fe-2S)-binding protein. (458 aa)
Meso_3638KEGG: mlo:mlr7027 hypothetical protein. (115 aa)
Meso_3639PFAM: AMP-dependent synthetase and ligase; KEGG: bbr:BB0583 crotonobetaine/carnitine-CoA ligase. (512 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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