STRINGSTRING
Meso_0021 Meso_0021 Meso_0022 Meso_0022 Meso_0023 Meso_0023 Meso_0168 Meso_0168 Meso_0589 Meso_0589 Meso_0723 Meso_0723 Meso_0911 Meso_0911 Meso_0918 Meso_0918 Meso_0930 Meso_0930 Meso_0931 Meso_0931 Meso_1360 Meso_1360 Meso_1523 Meso_1523 Meso_1524 Meso_1524 Meso_1940 Meso_1940 Meso_2481 Meso_2481 Meso_2825 Meso_2825 Meso_2945 Meso_2945 Meso_2946 Meso_2946 Meso_2947 Meso_2947 Meso_2948 Meso_2948 Meso_2949 Meso_2949 Meso_2950 Meso_2950 Meso_2951 Meso_2951 Meso_2952 Meso_2952 Meso_2953 Meso_2953 Meso_2954 Meso_2954 Meso_3033 Meso_3033 Meso_3034 Meso_3034 Meso_3035 Meso_3035 Meso_3036 Meso_3036 Meso_3278 Meso_3278 Meso_3279 Meso_3279 Meso_3281 Meso_3281 Meso_3374 Meso_3374 Meso_3375 Meso_3375 Meso_3505 Meso_3505 Meso_3640 Meso_3640 Meso_3751 Meso_3751 Meso_3752 Meso_3752 Meso_4101 Meso_4101
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Meso_0021PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding NAD-dependent glycerol-3-phosphate dehydrogenase-like; KEGG: mlo:mlr5629 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase. (740 aa)
Meso_0022TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; KEGG: mlo:mlr5628 probable acyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
Meso_0023PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mlo:mlr5624 probable acyl-CoA dehydrogenase. (598 aa)
Meso_0168TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mlr6539 acetoacetyl-CoA synthetase. (652 aa)
Meso_0589PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: sme:SMb20753 putative acyl-CoA dehydrogenase protein. (380 aa)
Meso_0723PFAM: acyl-CoA dehydrogenase-like; KEGG: mlo:mlr7452 probable acyl-CoA dehydrogenase. (591 aa)
Meso_0911Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (568 aa)
Meso_09183-methylcrotonoyl-CoA carboxylase, alpha subunit; PFAM: biotin/lipoyl attachment ATP-dependent carboxylate-amine ligase-like, ATP-grasp Carbamoyl-phosphate synthase L chain, ATP-binding Carbamoyl-phosphate synthetase large chain-like biotin carboxylase-like RimK-like ATP-grasp; KEGG: mlo:mll7727 3-methylcrotonyl-CoA carboxylase biotin-containing subunit. (650 aa)
Meso_0930PFAM: carboxyl transferase; KEGG: mlo:mll7731 3-methylcrotonyl-CoA carboxylase, beta subunit. (535 aa)
Meso_0931PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mlo:mll7732 isovaleryl-CoA-dehydrogenase. (386 aa)
Meso_1360PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mlo:mll0685 probable acyl-CoA dehydrogenase. (543 aa)
Meso_1523TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; KEGG: nwi:Nwi_2994 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (462 aa)
Meso_1524PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: nwi:Nwi_2993 3-hydroxyacyl-CoA dehydrogenase NAD-binding. (706 aa)
Meso_1940PFAM: MaoC-like dehydratase; KEGG: mag:amb0831 acyl dehydratase. (146 aa)
Meso_2481PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: bms:BR1085 glutaryl-CoA dehydrogenase. (406 aa)
Meso_28253-oxoadipyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: mlo:mll4180 beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
Meso_2945PFAM: Alpha/beta hydrolase fold-3; KEGG: ret:RHE_CH01714 putative esterase/lipase/thioesterase family protein. (287 aa)
Meso_2946PFAM: 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: ppu:PP3282 3-hydroxyacyl-CoA dehydrogenase PaaC. (485 aa)
Meso_2947PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: pae:PA5234 quinone oxidoreductase. (335 aa)
Meso_2948PFAM: 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: sth:STH214 3-hydroxyacyl-CoA dehydrogenase. (506 aa)
Meso_2949PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: chy:CHY_1323 butyryl-CoA dehydrogenase. (388 aa)
Meso_2950PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_4004 short-chain dehydrogenase/reductase SDR. (234 aa)
Meso_2951PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_C6106 enoyl-CoA hydratase/isomerase. (257 aa)
Meso_2952PFAM: AMP-dependent synthetase and ligase; KEGG: ece:Z2730 hypothetical protein. (541 aa)
Meso_29531,4-Dihydroxy-2-naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gka:GK2873 naphthoate synthase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
Meso_2954PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB4678 CaiB/BaiF family protein; Belongs to the CoA-transferase III family. (408 aa)
Meso_3033PFAM: electron transfer flavoprotein beta-subunit; KEGG: mlo:mlr3487 electron transfer flavoprotein beta chain, (ETFSS). (249 aa)
Meso_3034PFAM: electron transfer flavoprotein beta-subunit electron transfer flavoprotein, alpha subunit; KEGG: bmb:BruAb1_1946 EtfA, electron transfer flavoprotein, alpha subunit. (309 aa)
Meso_3035PFAM: 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mlo:mlr3490 3-hydroxybutyryl-CoA dehydrogenase. (293 aa)
Meso_3036PFAM: acyl-CoA dehydrogenase-like; KEGG: nwi:Nwi_2995 acyl-CoA dehydrogenase. (757 aa)
Meso_3278PFAM: acyl-CoA dehydrogenase-like; KEGG: rpb:RPB_0558 acyl-CoA dehydrogenase-like. (383 aa)
Meso_3279PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: reu:Reut_C6297 acyl-CoA dehydrogenase, C-terminal. (358 aa)
Meso_3281PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: tfu:Tfu_1647 acyl-CoA dehydrogenase. (395 aa)
Meso_3374TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; KEGG: mlo:mlr3847 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
Meso_3375TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_0747 short-chain dehydrogenase/reductase. (240 aa)
Meso_3505PFAM: Thiolase; KEGG: sme:SMc00262 putative 3-ketoacyl-CoA thiolase protein; Belongs to the thiolase-like superfamily. Thiolase family. (389 aa)
Meso_3640PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_A1906 enoyl-CoA hydratase/isomerase. (256 aa)
Meso_3751PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 6-phosphogluconate dehydrogenase, NAD-binding 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: bpm:BURPS1710b_0633 enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase. (677 aa)
Meso_3752PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr3445 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)
Meso_4101PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mlo:mll5584 enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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