27 items (Chelativorans sp. BNC1) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Meso_0117	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family. (473 aa)
	Meso_0602	PFAM: type II secretion system protein; KEGG: sme:SMa1562 hypothetical protein. (323 aa)
	Meso_0603	PFAM: type II secretion system protein; KEGG: sme:SMa1564 hypothetical protein. (338 aa)
	Meso_0604	PFAM: type II secretion system protein E; KEGG: sme:SMa1568 probable CpaF2 pilus assembly protein. (476 aa)
	Meso_0605	PFAM: Flp/Fap pilin component; KEGG: sme:SMa1570 probable PilA2 pilus assembly protein. (57 aa)
	Meso_0606	KEGG: sme:SMa1580 hypothetical protein. (167 aa)
	Meso_0608	PFAM: TadE-like; KEGG: sme:SMa1573 probable CpaE2 pilus assembly protein. (580 aa)
	Meso_0609	KEGG: sme:SMa1576 probable CpaB2 pilus assembly protein. (267 aa)
	Meso_0610	PFAM: peptidase A24A, prepilin type IV; KEGG: sme:SMa1578 prepilin peptidase CpaA. (170 aa)
	Meso_1014	KEGG: atc:AGR_C_3197 hypothetical protein. (380 aa)
	Meso_1724	KEGG: mlo:mll0186 hypothetical protein. (209 aa)
	Meso_1725	PFAM: type IV pilus assembly PilZ; KEGG: mlo:mll0185 hypothetical protein. (202 aa)
	Meso_2084	KEGG: mlo:mlr7847 hypothetical protein. (549 aa)
	Meso_3180	PFAM: protein of unknown function DUF1465; KEGG: mlo:mll3903 hypothetical protein. (176 aa)
	Meso_3954	PFAM: TPR repeat Tetratricopeptide TPR_4 Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: mlo:mll5605 hypothetical protein. (260 aa)
	Meso_3996	KEGG: mlo:mlr5595 pilus assembly protein cpaB. (270 aa)
	Meso_3997	PFAM: type II and III secretion system protein transport-associated; KEGG: mlo:mlr5597 exporter protein, cpaC; Belongs to the bacterial secretin family. (516 aa)
	Meso_3998	TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; KEGG: mlo:mlr5598 pilus assembly protein cpaD. (226 aa)
	Meso_3999	KEGG: sme:SMc04109 putative response regulator protein. (422 aa)
	Meso_4000	PFAM: type II secretion system protein E; KEGG: mlo:mlr5602 secretory protein kinase, cpaF. (500 aa)
	Meso_4001	PFAM: type II secretion system protein; KEGG: mlo:mlr5603 hypothetical protein. (337 aa)
	Meso_4002	PFAM: type II secretion system protein; KEGG: mlo:mlr5604 hypothetical protein. (329 aa)
	Meso_4094	PFAM: peptidase A24A, prepilin type IV; KEGG: mlo:mlr5594 prepilin peptidase CpaA. (173 aa)
	Meso_4095	PFAM: Flp/Fap pilin component; KEGG: mlo:msr5593 fimbriae associated protein. (60 aa)
	Meso_4096	KEGG: mlo:mll5591 hypothetical protein. (137 aa)
	Meso_4097	PFAM: TadE-like; KEGG: bja:blr3942 hypothetical protein. (189 aa)
	Meso_4098	KEGG: mlo:mll5590 hypothetical protein. (205 aa)

Your Current Organism:

Chelativorans sp. BNC1

NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Meso_0117	Meso_0602	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	PFAM: type II secretion system protein; KEGG: sme:SMa1562 hypothetical protein.	0.850
Meso_0117	Meso_0603	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	PFAM: type II secretion system protein; KEGG: sme:SMa1564 hypothetical protein.	0.827
Meso_0117	Meso_0604	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	PFAM: type II secretion system protein E; KEGG: sme:SMa1568 probable CpaF2 pilus assembly protein.	0.842
Meso_0117	Meso_0605	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	PFAM: Flp/Fap pilin component; KEGG: sme:SMa1570 probable PilA2 pilus assembly protein.	0.487
Meso_0117	Meso_0608	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	PFAM: TadE-like; KEGG: sme:SMa1573 probable CpaE2 pilus assembly protein.	0.857
Meso_0117	Meso_0609	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	KEGG: sme:SMa1576 probable CpaB2 pilus assembly protein.	0.901
Meso_0117	Meso_2084	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	KEGG: mlo:mlr7847 hypothetical protein.	0.561
Meso_0117	Meso_3996	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	KEGG: mlo:mlr5595 pilus assembly protein cpaB.	0.900
Meso_0117	Meso_3999	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	KEGG: sme:SMc04109 putative response regulator protein.	0.807
Meso_0117	Meso_4000	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	PFAM: type II secretion system protein E; KEGG: mlo:mlr5602 secretory protein kinase, cpaF.	0.842
Meso_0117	Meso_4001	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	PFAM: type II secretion system protein; KEGG: mlo:mlr5603 hypothetical protein.	0.826
Meso_0117	Meso_4002	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	PFAM: type II secretion system protein; KEGG: mlo:mlr5604 hypothetical protein.	0.850
Meso_0117	Meso_4095	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	PFAM: Flp/Fap pilin component; KEGG: mlo:msr5593 fimbriae associated protein.	0.471
Meso_0602	Meso_0117	PFAM: type II secretion system protein; KEGG: sme:SMa1562 hypothetical protein.	Flp pilus assembly protein secretin CpaC-like protein; KEGG: bpm:BURPS1710b_2040 RhcC2; Belongs to the bacterial secretin family.	0.850
Meso_0602	Meso_0603	PFAM: type II secretion system protein; KEGG: sme:SMa1562 hypothetical protein.	PFAM: type II secretion system protein; KEGG: sme:SMa1564 hypothetical protein.	0.983
Meso_0602	Meso_0604	PFAM: type II secretion system protein; KEGG: sme:SMa1562 hypothetical protein.	PFAM: type II secretion system protein E; KEGG: sme:SMa1568 probable CpaF2 pilus assembly protein.	0.962
Meso_0602	Meso_0605	PFAM: type II secretion system protein; KEGG: sme:SMa1562 hypothetical protein.	PFAM: Flp/Fap pilin component; KEGG: sme:SMa1570 probable PilA2 pilus assembly protein.	0.873
Meso_0602	Meso_0606	PFAM: type II secretion system protein; KEGG: sme:SMa1562 hypothetical protein.	KEGG: sme:SMa1580 hypothetical protein.	0.692
Meso_0602	Meso_0608	PFAM: type II secretion system protein; KEGG: sme:SMa1562 hypothetical protein.	PFAM: TadE-like; KEGG: sme:SMa1573 probable CpaE2 pilus assembly protein.	0.960
Meso_0602	Meso_0609	PFAM: type II secretion system protein; KEGG: sme:SMa1562 hypothetical protein.	KEGG: sme:SMa1576 probable CpaB2 pilus assembly protein.	0.917