STRINGSTRING
Meso_0605 Meso_0605 Meso_0606 Meso_0606 Meso_0608 Meso_0608 Meso_0609 Meso_0609 Meso_0610 Meso_0610
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0605PFAM: Flp/Fap pilin component; KEGG: sme:SMa1570 probable PilA2 pilus assembly protein. (57 aa)
Meso_0606KEGG: sme:SMa1580 hypothetical protein. (167 aa)
Meso_0608PFAM: TadE-like; KEGG: sme:SMa1573 probable CpaE2 pilus assembly protein. (580 aa)
Meso_0609KEGG: sme:SMa1576 probable CpaB2 pilus assembly protein. (267 aa)
Meso_0610PFAM: peptidase A24A, prepilin type IV; KEGG: sme:SMa1578 prepilin peptidase CpaA. (170 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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