STRINGSTRING
Meso_0469 Meso_0469 Meso_1569 Meso_1569 Meso_1919 Meso_1919 Meso_1920 Meso_1920 Meso_1921 Meso_1921 Meso_1923 Meso_1923 Meso_1924 Meso_1924 Meso_2286 Meso_2286 Meso_2287 Meso_2287 Meso_2288 Meso_2288 Meso_2289 Meso_2289 Meso_2290 Meso_2290 Meso_2618 Meso_2618 Meso_2619 Meso_2619 Meso_2620 Meso_2620 Meso_2795 Meso_2795 Meso_2796 Meso_2796 Meso_3331 Meso_3331 Meso_3332 Meso_3332 Meso_3333 Meso_3333 Meso_3334 Meso_3334
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0469PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mll8348 multidrug efflux protein. (479 aa)
Meso_1569TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mlo:mll1107 outer membrane protein, nodT candidate. (461 aa)
Meso_1919TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr8233 efflux pump protein FarB. (513 aa)
Meso_1920PFAM: secretion protein HlyD; KEGG: mlo:mlr8231 efflux pump protein FarA. (383 aa)
Meso_1921PFAM: regulatory protein, MarR; KEGG: mlo:mlr8230 transcriptional regulator. (169 aa)
Meso_1923PFAM: aminotransferase, class I and II; KEGG: mlo:mll0935 probable aminotransferase. (405 aa)
Meso_1924Hypothetical protein. (113 aa)
Meso_2286PFAM: acriflavin resistance protein; KEGG: sil:SPO1525 transporter, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1089 aa)
Meso_2287TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sil:SPO1526 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (332 aa)
Meso_2288KEGG: rpb:RPB_4303 hypothetical protein. (67 aa)
Meso_2289Sulfide-quinone oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3562 sulfide-quinone reductase. (430 aa)
Meso_2290PFAM: regulatory protein, ArsR; KEGG: rpb:RPB_4378 transcriptional regulator, ArsR family. (83 aa)
Meso_2618PFAM: acriflavin resistance protein; KEGG: mlo:mlr3649 RND efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1024 aa)
Meso_2619TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mlo:mlr3647 RND efflux membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (405 aa)
Meso_2620Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mlo:mll3646 hypothetical protein. (194 aa)
Meso_2795TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: bmb:BruAb1_0302 transporter, hypothetical; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (388 aa)
Meso_2796PFAM: acriflavin resistance protein; KEGG: bms:BR0277 AcrB/AcrD/AcrF multidrug efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1040 aa)
Meso_3331KEGG: dar:Daro_2051 conserved hypothetical transmembrane protein. (52 aa)
Meso_3332PFAM: acriflavin resistance protein; KEGG: mlo:mll3832 multidrug resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1057 aa)
Meso_3333TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mlo:mll3833 similar to periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (377 aa)
Meso_3334PFAM: regulatory protein, TetR; KEGG: mlo:mlr3838 transcriptional regulator. (202 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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