STRINGSTRING
Meso_2977 Meso_2977 Meso_2978 Meso_2978 Meso_2979 Meso_2979 Meso_2980 Meso_2980 Meso_2981 Meso_2981
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_2977PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cya:CYA_2230 quaternary amine uptake ABC transporter (QAT) family, substrate-binding protein. (343 aa)
Meso_2978PFAM: phenylalanine/histidine ammonia-lyase; KEGG: mlo:mll7124 histidine ammonia-lyase. (504 aa)
Meso_2979PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lmf:LMOf2365_1441 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein. (210 aa)
Meso_2980PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cya:CYA_2571 quaternary amine ABC transporter (QAT) family, permease protein. (211 aa)
Meso_2981PFAM: ABC transporter related; SMART: ATPase; KEGG: sth:STH2630 glycine betaine/carnitine/choline ABC transporter ATP-binding protein. (317 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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