STRINGSTRING
Meso_0844 Meso_0844 Meso_1947 Meso_1947 Meso_1958 Meso_1958 Meso_3971 Meso_3971 Meso_3974 Meso_3974
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0844PFAM: aldehyde dehydrogenase; KEGG: sme:SMb20262 putative semialdehyde dehydrogenase protein. (508 aa)
Meso_1947PFAM: dihydrodipicolinate synthetase; KEGG: atc:AGR_L_3338 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. (301 aa)
Meso_1958PFAM: aldehyde dehydrogenase; KEGG: bms:BR0210 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family. (479 aa)
Meso_3971PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll7953 hypothetical protein; Belongs to the DapA family. (309 aa)
Meso_3974PFAM: aldehyde dehydrogenase; KEGG: bms:BR0210 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family. (475 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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