STRINGSTRING
Meso_0334 Meso_0334 Meso_0568 Meso_0568 Meso_2357 Meso_2357 Meso_2933 Meso_2933 Meso_3321 Meso_3321
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0334Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH GntR-like; KEGG: atc:AGR_L_357 hypothetical protein. (228 aa)
Meso_0568Transcriptional regulator, GntR family; PFAM: GCN5-related N-acetyltransferase regulatory protein GntR, HTH GntR-like; KEGG: reu:Reut_B5875 regulatory protein GntR, HTH:GntR, C-terminal. (396 aa)
Meso_2357Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH GntR-like; KEGG: mlo:mlr7177 transcriptional regulator. (245 aa)
Meso_2933Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH GntR-like; KEGG: dar:Daro_3790 regulatory protein GntR, HTH:GntR, C-terminal. (245 aa)
Meso_3321Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH GntR-like; KEGG: mlo:mlr3982 putative transcriptional regulator. (230 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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