STRINGSTRING
Meso_1504 Meso_1504 Meso_1505 Meso_1505 Meso_1506 Meso_1506 Meso_1855 Meso_1855 Meso_1856 Meso_1856 Meso_1857 Meso_1857 Meso_1858 Meso_1858 Meso_2375 Meso_2375 Meso_2622 Meso_2622 Meso_2625 Meso_2625 Meso_2626 Meso_2626 Meso_2633 Meso_2633 Meso_2634 Meso_2634 Meso_2635 Meso_2635 Meso_2636 Meso_2636 Meso_2637 Meso_2637 Meso_3632 Meso_3632 Meso_3633 Meso_3633 Meso_3634 Meso_3634 Meso_3635 Meso_3635 Meso_3641 Meso_3641 Meso_3642 Meso_3642 Meso_3643 Meso_3643
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_1504PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_321 dipeptide transport system permease protein DppC. (289 aa)
Meso_1505PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psb:Psyr_2679 binding-protein-dependent transport systems inner membrane component. (315 aa)
Meso_1506PFAM: extracellular solute-binding protein, family 5; KEGG: psp:PSPPH_2786 ABC-transport protein, solute-binding component. (501 aa)
Meso_1855TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: atc:AGR_L_3525 putative hemin-binding lipoprotein. (540 aa)
Meso_1856PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll9135 Dipeptide transport system permease protein. (337 aa)
Meso_1857PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll9134 Dipeptide transport system permease protein. (283 aa)
Meso_1858KEGG: rpb:RPB_0234 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (321 aa)
Meso_2375TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: bha:BH1016 oligopeptide transport system substrate-binding protein. (514 aa)
Meso_2622PFAM: extracellular solute-binding protein, family 5; KEGG: sil:SPO2835 dipeptide ABC transporter, periplasmic dipeptide-binding protein. (517 aa)
Meso_2625PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2833 dipeptide ABC transporter, permease protein. (288 aa)
Meso_2626PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2834 dipeptide ABC trasnporter, permease protein. (318 aa)
Meso_2633TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: sil:SPO2835 dipeptide ABC transporter, periplasmic dipeptide-binding protein. (515 aa)
Meso_2634KEGG: sil:SPO2831 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (314 aa)
Meso_2635KEGG: bja:blr3232 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (325 aa)
Meso_2636PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2833 dipeptide ABC transporter, permease protein. (283 aa)
Meso_2637PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3030 ABC peptide/opine transporter, inner membrane subunit. (315 aa)
Meso_3632KEGG: mlo:mll7347 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (691 aa)
Meso_3633PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH130 oligopeptide ABC transporter permease protein. (288 aa)
Meso_3634PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0300 ABC transporter, permease. (313 aa)
Meso_3635PFAM: extracellular solute-binding protein, family 5; KEGG: ret:RHE_PC00130 probable peptide ABC transporter, substrate-binding protein. (515 aa)
Meso_3641PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3343 ABC transporter permease protein. (272 aa)
Meso_3642PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3342 ABC transporter permease protein. (313 aa)
Meso_3643TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: rpb:RPB_1226 extracellular solute-binding protein, family 5. (533 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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