STRINGSTRING
Meso_0163 Meso_0163 potA potA Meso_0165 Meso_0165 Meso_0166 Meso_0166 Meso_0169 Meso_0169 Meso_0170 Meso_0170 Meso_0826 Meso_0826 Meso_0827 Meso_0827 Meso_0828 Meso_0828 Meso_1807 Meso_1807 Meso_1862 Meso_1862 Meso_1863 Meso_1863 Meso_1864 Meso_1864 Meso_1865 Meso_1865 potA-2 potA-2 Meso_1936 Meso_1936 Meso_1937 Meso_1937 Meso_1938 Meso_1938 Meso_1939 Meso_1939 potA-3 potA-3 Meso_2370 Meso_2370 Meso_2371 Meso_2371 Meso_2372 Meso_2372 Meso_2658 Meso_2658 Meso_2659 Meso_2659 Meso_2660 Meso_2660 Meso_2661 Meso_2661 Meso_3259 Meso_3259 Meso_3260 Meso_3260 thiQ thiQ potA-4 potA-4 Meso_3744 Meso_3744 Meso_3745 Meso_3745 Meso_3746 Meso_3746 Meso_3747 Meso_3747 Meso_3748 Meso_3748 Meso_3749 Meso_3749 Meso_3955 Meso_3955 Meso_3956 Meso_3956 Meso_3957 Meso_3957 Meso_3958 Meso_3958
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0163Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (365 aa)
potASpermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (379 aa)
Meso_0165PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI0413 putrescine transport system permease protein PotH. (303 aa)
Meso_0166PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6537 ABC transporter, polyamine transport protein, permease protein. (272 aa)
Meso_0169PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00775 putative iron(III) permease protein. (566 aa)
Meso_0170PFAM: extracellular solute-binding protein, family 1; KEGG: sme:SMc00784 putative iron binding protein. (349 aa)
Meso_0826PFAM: ABC transporter related; SMART: ATPase; KEGG: atc:AGR_C_3896 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (357 aa)
Meso_0827PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB4775 putative iron(III)-transport system permease. (571 aa)
Meso_0828Hypothetical protein; KEGG: bbr:BB4774 putative iron(III)-binding periplasmic protein precursor. (351 aa)
Meso_1807PFAM: ABC transporter related; SMART: ATPase; KEGG: sme:SMc02068 putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (367 aa)
Meso_1862PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP0414 polyamine ABC transporter, permease protein. (272 aa)
Meso_1863PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1234 motC. (285 aa)
Meso_1864PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: bja:bll3241 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (361 aa)
Meso_1865PFAM: extracellular solute-binding protein, family 1; KEGG: bja:bll6825 ABC transporter substrate-binding protein. (352 aa)
potA-2Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (357 aa)
Meso_1936KEGG: pae:PA0222 putative spermidine/putrescine transport system substrate-binding protein. (359 aa)
Meso_1937PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll6253 ABC transporter permease protein. (606 aa)
Meso_1938PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB1124 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (271 aa)
Meso_1939PFAM: thioesterase superfamily; KEGG: gka:GK1870 hypothetical protein. (145 aa)
potA-3Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (373 aa)
Meso_2370PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3546 ABC transporter permease protein. (274 aa)
Meso_2371PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPOA0383 spermidine/putrescine ABC transporter, permease protein. (275 aa)
Meso_2372TIGRFAM: Twin-arginine translocation pathway signal; KEGG: ret:RHE_PC00028 probable polyamine ABC transporter, substrate-binding protein. (364 aa)
Meso_2658TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rru:Rru_A3199 extracellular solute-binding protein, family 1. (350 aa)
Meso_2659PFAM: ABC transporter related; SMART: ATPase; KEGG: pub:SAR11_1337 spermidine/putrescine transport ATP-binding protein PotA. (374 aa)
Meso_2660PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1307 similar to ABC-type Fe3+ transport system permease component. (588 aa)
Meso_2661KEGG: rpa:RPA2648 hypothetical protein. (261 aa)
Meso_3259TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily thiamine ABC transporter, periplasmic binding protein; KEGG: mlo:mll3867 thiamin ABC transporter, periplasmic-binding protein. (332 aa)
Meso_3260TIGRFAM: thiamine ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3865 transport system permease protein. (545 aa)
thiQABC transporter, ATPase subunit, ThiQ subfamily; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. (246 aa)
potA-4Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (370 aa)
Meso_3744TIGRFAM: Twin-arginine translocation pathway signal; KEGG: bld:BLi00397 putative spermidine/putrescine-binding periplasmic protein 2 precursor; RBL01741. (345 aa)
Meso_3745PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3517 ABC polyamine/opine transporter, inner membrane subunit. (299 aa)
Meso_3746PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi00400 putative spermidineputrescine ABC transporter permease protein; RBL01738. (268 aa)
Meso_3747PFAM: Rhodanese-like; KEGG: bms:BR1055 rhodanese family protein. (290 aa)
Meso_3748Hypothetical protein; KEGG: bbr:BB0389 4,5-dihydroxyphthalate decarboxylase. (321 aa)
Meso_3749Hypothetical protein. (167 aa)
Meso_3955TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 1; KEGG: hch:HCH_01471 spermidine/putrescine-binding periplasmic protein. (374 aa)
Meso_3956PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: dra:DR1302 spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (355 aa)
Meso_3957PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_01473 ABC-type spermidine/putrescine transport system, permease component I. (293 aa)
Meso_3958PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_01474 ABC-type spermidine/putrescine transport system, permease component II. (267 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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