STRINGSTRING
Meso_1853 Meso_1853 Meso_4078 Meso_4078 Meso_3880 Meso_3880 Meso_3755 Meso_3755 Meso_3658 Meso_3658 deoA deoA Meso_2526 Meso_2526 Meso_2480 Meso_2480 Meso_1831 Meso_1831 pyrC pyrC pyrB pyrB Meso_1289 Meso_1289 Meso_0820 Meso_0820 pyrF pyrF Meso_2378 Meso_2378 Meso_2385 Meso_2385 Meso_2464 Meso_2464 Meso_0446 Meso_0446 pyrD pyrD carA carA Meso_2306 Meso_2306 Meso_2361 Meso_2361
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_1853KEGG: ava:Ava_1266 xenobiotic compound monooxygenase, DszA family, A subunit. (456 aa)
Meso_4078PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV923 putative hydrolase. (267 aa)
Meso_3880TIGRFAM: putative thymidine phosphorylase; PFAM: glycosyl transferase, family 3 Pyrimidine nucleoside phosphorylase-like; KEGG: hch:HCH_01516 thymidine phosphorylase. (509 aa)
Meso_3755PFAM: flavin reductase-like, FMN-binding; KEGG: reu:Reut_A1544 flavin reductase-like, FMN-binding. (154 aa)
Meso_3658PFAM: phosphoribosyltransferase; KEGG: mlo:mll3162 uracil phosphoribosyltransferase. (148 aa)
deoAThymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. (438 aa)
Meso_25263-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_PF00194 probable 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase protein. (275 aa)
Meso_2480PFAM: Endoribonuclease L-PSP; KEGG: mlo:mll5429 hypothetical protein. (131 aa)
Meso_1831KEGG: sme:SMa2101 probable nitrilotriacetate monooxygenase component A. (430 aa)
pyrCDihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. (346 aa)
pyrBTIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: mlo:mlr0686 aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (319 aa)
Meso_1289PFAM: flavin reductase-like, FMN-binding; KEGG: mlo:mlr0087 putative 4-hydroxyphenylacetate 3-monooxygenase. (164 aa)
Meso_0820PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_II1498 hydrolase, alpha/beta fold family. (282 aa)
pyrFOrotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (235 aa)
Meso_2378KEGG: ava:Ava_1266 xenobiotic compound monooxygenase, DszA family, A subunit. (440 aa)
Meso_2385PFAM: flavin reductase-like, FMN-binding; KEGG: reu:Reut_B5770 flavin reductase-like, FMN-binding. (162 aa)
Meso_2464PFAM: flavin reductase-like, FMN-binding; KEGG: psb:Psyr_0995 flavin reductase-like. (170 aa)
Meso_0446TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold Ndr; KEGG: sme:SMb20579 putative beta-ketoadipate enol-lactone hydrolase protein. (264 aa)
pyrDDihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (363 aa)
carATIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I Carbamoyl-phosphate synthase, small chain; KEGG: mlo:mlr2489 carbamoyl-phosphate synthetase small subunit; Belongs to the CarA family. (399 aa)
Meso_2306PFAM: isochorismatase hydrolase; KEGG: bpa:BPP3892 putative hydrolase. (246 aa)
Meso_2361KEGG: ava:Ava_1266 xenobiotic compound monooxygenase, DszA family, A subunit. (441 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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