STRINGSTRING
Meso_2670 Meso_2670 Meso_2707 Meso_2707 Meso_2754 Meso_2754 Meso_1594 Meso_1594 Meso_2856 Meso_2856 Meso_3189 Meso_3189 Meso_3558 Meso_3558 Meso_3574 Meso_3574 Meso_3593 Meso_3593 Meso_3665 Meso_3665 rbsA rbsA Meso_3772 Meso_3772 Meso_3778 Meso_3778 Meso_2756 Meso_2756 Meso_1156 Meso_1156 Meso_1095 Meso_1095 Meso_0652 Meso_0652 Meso_0265 Meso_0265 Meso_2304 Meso_2304 Meso_2593 Meso_2593 Meso_2669 Meso_2669
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_2670PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: mlo:mll7118 ABC-transport protein, ATP-binding component. (622 aa)
Meso_2707PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr4772 sugar ABC transporter, permease protein; TC 3.A.1.1.-. (315 aa)
Meso_2754PFAM: polysaccharide export protein; KEGG: bpm:BURPS1710b_3301 WcbC. (391 aa)
Meso_1594Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PB00022 probable sugar ABC transporter, permease protein; TC 3.A.1.1.-. (288 aa)
Meso_2856PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2872 ABC alpha-glucoside transporter, inner membrane subunit AglF. (346 aa)
Meso_3189KEGG: mlo:mll3934 ABC transporter, ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase. (601 aa)
Meso_3558PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1443 ABC sugar transporter, inner membrane subunit; TC 3.A.1.1.-. (295 aa)
Meso_3574PFAM: PTS system fructose subfamily IIA component; KEGG: mlo:mll5091 fructose-specific IIA component. (133 aa)
Meso_3593PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: mlo:mlr4641 ABC transporter, ATP-binding protein. (624 aa)
Meso_3665TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: mlo:mll3194 phosphotransferase system enzyme II. (154 aa)
rbsAMonosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (506 aa)
Meso_3772Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO0539 probable sugar transporter membrane protein; TC 3.A.1.1.-. (289 aa)
Meso_3778Mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_839 maltose transport inner membrane protein. (290 aa)
Meso_2756KEGG: sme:SMb20831 putative polysaccharide export-assoiated protein. (400 aa)
Meso_1156PFAM: polysaccharide export protein; KEGG: bmb:BruAb1_0798 capsule polysaccharide export protein, hypothetical. (187 aa)
Meso_1095PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0435 sugar ABC transporter permease; TC 3.A.1.1.-. (281 aa)
Meso_0652PFAM: polysaccharide export protein; KEGG: mlo:mll5251 exopolysaccharide production protein exoF. (427 aa)
Meso_0265Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sme:SMb20017 putative sugar ABC transporter ATP-binding protein ABC transporter; TC 3.A.1.2.-. (500 aa)
Meso_2304Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0800 ABC-type sugar transport systems, permease components; TC 3.A.1.1.-. (306 aa)
Meso_2593PFAM: polysaccharide export protein; KEGG: ret:RHE_CH01370 exopolysaccharide biosynthesis protein (OMA family outer membrane saccharide export protein). (442 aa)
Meso_2669PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: ret:RHE_PE00019 putative multidrug ABC transporter, ATP-binding protein. (637 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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