STRINGSTRING
Meso_0322 Meso_0322 Meso_3924 Meso_3924 aroA aroA Meso_3599 Meso_3599 Meso_3429 Meso_3429 hemC hemC Meso_3182 Meso_3182 Meso_3031 Meso_3031 ubiX ubiX Meso_2727 Meso_2727 Meso_2697 Meso_2697 thiE thiE nadA nadA Meso_2185 Meso_2185 Meso_1794 Meso_1794 miaA miaA kdsA kdsA Meso_1462 Meso_1462 Meso_1424 Meso_1424 Meso_1412 Meso_1412 Meso_1385 Meso_1385 Meso_1167 Meso_1167 ribH ribH Meso_1137 Meso_1137 ctaB ctaB ubiA ubiA murA murA metZ metZ
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
Predicted Interactions
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gene co-occurrence
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Your Input:
Meso_0322PFAM: glutathione S-transferase-like; KEGG: ret:RHE_PB00095 probable glutathione S-transferase protein; Belongs to the GST superfamily. (291 aa)
Meso_3924PFAM: S-adenosylmethionine synthetase; KEGG: atc:AGR_C_632 S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family. (443 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (449 aa)
Meso_3599PFAM: glutathione S-transferase-like; KEGG: mlo:mlr4635 glutathione S-transferase. (229 aa)
Meso_3429Farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; KEGG: mlo:mlr3784 geranyltranstransferase (farnesyl-diphosphate synthase); Belongs to the FPP/GGPP synthase family. (305 aa)
hemCHydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (309 aa)
Meso_3182PFAM: thiamine monophosphate synthase; KEGG: mlo:mlr3913 thiamine-phosphate pyrophosphorylase. (219 aa)
Meso_3031TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mlo:mlr3485 hypothetical protein; Belongs to the Cob(I)alamin adenosyltransferase family. (192 aa)
ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (197 aa)
Meso_2727PFAM: homospermidine synthase; KEGG: mlo:mlr3014 homospermidine synthase. (481 aa)
Meso_2697PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: ret:RHE_PB00059 putative methyltransferase protein. (248 aa)
thiEThiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. (206 aa)
nadAQuinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (324 aa)
Meso_2185KEGG: mlo:mll2799 putative glutathione S-transferase. (329 aa)
Meso_1794PFAM: Squalene/phytoene synthase; KEGG: mlo:mll1068 phytoene synthase. (274 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (292 aa)
kdsATIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: bme:BMEI0850 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase). (276 aa)
Meso_14623-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; KEGG: mlo:mll0826 phospho-2-dehydro-3-deoxyheptonate aldolase. (458 aa)
Meso_1424PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mlo:mlr0353 O-acetylserine (thiol) lyase. (346 aa)
Meso_1412Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. (278 aa)
Meso_1385Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (237 aa)
Meso_1167TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mlo:mlr8465 O-acetylhomoserine (thiol)-lyase. (427 aa)
ribH6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (156 aa)
Meso_1137TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: mlo:mlr8407 riboflavin synthase alpha chain. (204 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (310 aa)
ubiA4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. (327 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (429 aa)
metZO-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (396 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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