STRINGSTRING
Meso_0053 Meso_0053 Meso_3656 Meso_3656 Meso_3565 Meso_3565 Meso_3276 Meso_3276 Meso_2403 Meso_2403 Meso_0150 Meso_0150
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0053TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel; KEGG: pae:PA2470 gentisate 1,2-dioxygenase. (353 aa)
Meso_3656Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (268 aa)
Meso_3565Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel; KEGG: jan:Jann_2910 cupin 2 protein. (367 aa)
Meso_3276Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel; KEGG: eba:ebA5613 putative gentisate 1,2-dioxygenase oxidoreductase protein. (324 aa)
Meso_2403Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. (276 aa)
Meso_0150Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (279 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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