STRINGSTRING
Meso_1051 Meso_1051 Meso_3590 Meso_3590 Meso_3398 Meso_3398 Meso_3304 Meso_3304 Meso_2939 Meso_2939 Meso_2924 Meso_2924 Meso_2037 Meso_2037 Meso_1488 Meso_1488 Meso_1069 Meso_1069 Meso_1068 Meso_1068 Meso_1062 Meso_1062 Meso_1052 Meso_1052 Meso_0823 Meso_0823 Meso_0803 Meso_0803 Meso_0802 Meso_0802 Meso_0801 Meso_0801 dxs dxs
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_1051KEGG: bja:bll6809 hypothetical protein. (175 aa)
Meso_3590Acetolactate synthase, large subunit; PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: ret:RHE_PF00274 acetolactate synthase, large subunit protein (thiamine pyrophosphate-dependent enzyme). (541 aa)
Meso_3398TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component Transketolase, central region; KEGG: mlo:mll4301 alpha-ketoglutarate dehydrogenase. (994 aa)
Meso_3304PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: mpa:MAP3000c acetolactate synthase large subunit. (567 aa)
Meso_2939PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme-like TPP binding region; KEGG: eba:ebA5686 acetolactate synthase large subunit. (570 aa)
Meso_2924PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: eba:ebA5686 acetolactate synthase large subunit. (576 aa)
Meso_2037PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: mlo:mlr1615 acetolactate synthase large subunit. (549 aa)
Meso_1488TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: mlo:mll1433 acetolactate synthase large subunit. (600 aa)
Meso_1069PFAM: thiamine pyrophosphate enzyme-like TPP-binding; KEGG: bja:bll3171 hypothetical protein. (199 aa)
Meso_1068KEGG: bja:bll3172 putative sulfopyruvate decarboxylase subunit alpha. (182 aa)
Meso_1062Acetolactate synthase, large subunit; PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: bme:BMEII0351 acetolactate synthase large subunit. (556 aa)
Meso_1052PFAM: thiamine pyrophosphate enzyme-like TPP-binding; KEGG: bja:blr2858 probable sulfopyruvate decarboxylase. (196 aa)
Meso_0823PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: thiamine pyrophosphate-requiring enzyme; Belongs to the TPP enzyme family. (557 aa)
Meso_0803PFAM: thiamine pyrophosphate enzyme-like TPP-binding; KEGG: bbr:BB3569 hypothetical protein. (189 aa)
Meso_0802KEGG: bbr:BB3568 putative decarboxylase. (170 aa)
Meso_0801PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme-like TPP binding region; KEGG: bur:Bcep18194_A5914 thiamine pyrophosphate-requiring enzyme (putative benzoylformatedecarboxylase); Belongs to the TPP enzyme family. (594 aa)
dxs1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (650 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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