(4 nodes) Leucine binding network (Chelativorans sp. BNC1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Meso_3328	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A1746 extracellular ligand-binding receptor; TC 3.A.1.4.-. (366 aa)
	Meso_4012	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: bja:blr0671 hypothetical protein; TC 3.A.1.4.-. (402 aa)
	Meso_2499	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB0404 putative branched-chain amino acid binding protein; TC 3.A.1.4.-. (407 aa)
	Meso_0479	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB1151 putative branched-chain amino acid-binding protein; TC 3.A.1.4.-. (390 aa)

Your Current Organism:

Chelativorans sp. BNC1

NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Meso_0479	Meso_2499	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB1151 putative branched-chain amino acid-binding protein; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB0404 putative branched-chain amino acid binding protein; TC 3.A.1.4.-.	0.930
Meso_0479	Meso_3328	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB1151 putative branched-chain amino acid-binding protein; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A1746 extracellular ligand-binding receptor; TC 3.A.1.4.-.	0.929
Meso_2499	Meso_0479	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB0404 putative branched-chain amino acid binding protein; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB1151 putative branched-chain amino acid-binding protein; TC 3.A.1.4.-.	0.930
Meso_2499	Meso_3328	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB0404 putative branched-chain amino acid binding protein; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A1746 extracellular ligand-binding receptor; TC 3.A.1.4.-.	0.900
Meso_3328	Meso_0479	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A1746 extracellular ligand-binding receptor; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB1151 putative branched-chain amino acid-binding protein; TC 3.A.1.4.-.	0.929
Meso_3328	Meso_2499	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A1746 extracellular ligand-binding receptor; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB0404 putative branched-chain amino acid binding protein; TC 3.A.1.4.-.	0.900