STRINGSTRING
Meso_2455 Meso_2455 Meso_2463 Meso_2463 Meso_2470 Meso_2470 Meso_2845 Meso_2845 Meso_2929 Meso_2929 Meso_3044 Meso_3044 Meso_3221 Meso_3221 Meso_3560 Meso_3560 Meso_3776 Meso_3776 Meso_3564 Meso_3564 Meso_3952 Meso_3952 Meso_0810 Meso_0810 Meso_1089 Meso_1089 Meso_1132 Meso_1132 Meso_1507 Meso_1507 Meso_1921 Meso_1921 Meso_2109 Meso_2109 Meso_2141 Meso_2141
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_2455PFAM: regulatory protein, MarR; KEGG: mlo:mll8302 transcriptional regulator. (148 aa)
Meso_2463Transcriptional regulator, MarR family; TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein, MarR; KEGG: bmb:BruAb2_1099 transcriptional regulator, MarR family. (154 aa)
Meso_2470PFAM: regulatory protein, MarR transcriptional regulator TrmB Penicillinase repressor; KEGG: vfi:VFA1063 transcriptional regulator, MarR family. (162 aa)
Meso_2845Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: mlo:mlr5157 hypothetical protein. (166 aa)
Meso_2929PFAM: regulatory protein, MarR; KEGG: eba:ebA5682 transcriptional regulatory protein,MarR family. (315 aa)
Meso_3044Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: eba:ebA5386 bacterial regulatory protein, MarR. (165 aa)
Meso_3221Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: sme:SMc03824 putative transcription regulator protein. (153 aa)
Meso_3560Transcriptional regulator, MarR family; PFAM: ROK domain containing protein; KEGG: rsp:RSP_1441 regulatory protein, GntR family. (374 aa)
Meso_3776Transcriptional regulator, DeoR family; PFAM: putative sugar-binding region; KEGG: mlo:mll4931 transcriptional regulator, operon regulator; SmoC. (313 aa)
Meso_3564PFAM: regulatory protein, MarR; KEGG: bja:bll4221 transcriptional regulatory protein. (172 aa)
Meso_3952Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: mlo:mlr5607 hypothetical protein. (116 aa)
Meso_0810Transcriptional regulator, MarR family; TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein, MarR; KEGG: bja:blr2971 transcriptional regulatory protein. (184 aa)
Meso_1089Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: reu:Reut_B3774 regulatory protein, MarR. (161 aa)
Meso_1132PFAM: regulatory protein, MarR; KEGG: mlo:mlr8394 transcriptional regulator. (171 aa)
Meso_1507PFAM: ROK domain containing protein; KEGG: ret:RHE_CH01552 probable transcriptional regulator protein, ROK family. (393 aa)
Meso_1921PFAM: regulatory protein, MarR; KEGG: mlo:mlr8230 transcriptional regulator. (169 aa)
Meso_2109Transcriptional regulator, MarR family with acetyltransferase activity; PFAM: GCN5-related N-acetyltransferase regulatory protein, MarR; KEGG: mlo:mlr8209 hypothetical protein. (314 aa)
Meso_2141PFAM: regulatory protein, MarR; KEGG: mlo:mlr2665 probable transcriptional regulator. (174 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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