STRINGSTRING
Meso_1401 Meso_1401 Meso_1490 Meso_1490 Meso_2168 Meso_2168 Meso_2862 Meso_2862 Meso_3363 Meso_3363
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_1401PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mlr3188 hypothetical protein. (204 aa)
Meso_1490PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mll1430 hypothetical protein. (198 aa)
Meso_2168PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ppr:PBPRB1092 conserved hypothetical protein. (208 aa)
Meso_2862PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mll4363 hypothetical protein. (213 aa)
Meso_3363PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mll4109 hypothetical protein. (203 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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