STRINGSTRING
Meso_4076 Meso_4076 Meso_0090 Meso_0090 Meso_0091 Meso_0091 Meso_0162 Meso_0162 Meso_0280 Meso_0280 Meso_0340 Meso_0340 Meso_0341 Meso_0341 Meso_0596 Meso_0596 Meso_0600 Meso_0600 Meso_0601 Meso_0601 Meso_0621 Meso_0621 Meso_0797 Meso_0797 Meso_0894 Meso_0894 Meso_0902 Meso_0902 Meso_1347 Meso_1347 Meso_1348 Meso_1348 Meso_1448 Meso_1448 Meso_1616 Meso_1616 ntrC ntrC Meso_1740 Meso_1740 Meso_1904 Meso_1904 Meso_1942 Meso_1942 Meso_1944 Meso_1944 Meso_2032 Meso_2032 Meso_2142 Meso_2142 Meso_2212 Meso_2212 Meso_2213 Meso_2213 Meso_2221 Meso_2221 Meso_2222 Meso_2222 Meso_2731 Meso_2731 Meso_2750 Meso_2750 Meso_2909 Meso_2909 Meso_3094 Meso_3094 Meso_3106 Meso_3106 Meso_3109 Meso_3109 Meso_3116 Meso_3116 Meso_3424 Meso_3424 Meso_3571 Meso_3571 Meso_3680 Meso_3680 Meso_4041 Meso_4041
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_4076Histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like; KEGG: mlo:mll8067 two-component sensor histidine kinase. (416 aa)
Meso_0090Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-4; KEGG: mlo:mll5691 two-component sensor histidine kinase. (1163 aa)
Meso_0091Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR response regulator receiver Sigma-70, region 4 type 2; KEGG: mlo:mlr5684 two-component system, response regulator. (218 aa)
Meso_0162KEGG: mlo:mll6524 two-component system, regulatory protein. (143 aa)
Meso_0280Two component transcriptional regulator, winged helix family; PFAM: transcriptional regulatory protein-like; KEGG: mlo:mlr2935 two-component response regulator. (223 aa)
Meso_0340Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: bja:bll7016 two-component hybrid sensor and regulator. (816 aa)
Meso_0341PFAM: regulatory protein, LuxR response regulator receiver; KEGG: bja:blr7015 two-component response regulator. (216 aa)
Meso_0596Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR response regulator receiver sigma-70 region 4 Sigma-70, region 4 type 2; KEGG: sme:SMa1550 putative response regulator of two-component system. (228 aa)
Meso_0600CheA signal transduction histidine kinase; PFAM: response regulator receiver CheW-like protein ATP-binding region, ATPase-like Hpt; KEGG: sme:SMa1558 putative histidine kinase, chemotaxis. (706 aa)
Meso_0601Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (344 aa)
Meso_0621PFAM: response regulator receiver; KEGG: ccr:CC3015 response regulator. (120 aa)
Meso_0797PFAM: response regulator receiver; KEGG: ret:RHE_CH01734 probable two-component response regulator protein. (137 aa)
Meso_0894Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mlr7684 two-component system, regulatory protein. (222 aa)
Meso_0902Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mlr7695 two-component response regulator. (224 aa)
Meso_1347PFAM: response regulator receiver; KEGG: mlo:mll0861 response regulator. (123 aa)
Meso_1348TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein response regulator receiver; KEGG: mlo:mll0859 response regulator protein. (457 aa)
Meso_1448PFAM: response regulator receiver ANTAR; KEGG: mlo:mlr2855 two-component response regulator. (196 aa)
Meso_1616Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver sigma-54 factor, interaction region helix-turn-helix, Fis-type ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: mlo:mlr0400 nitrogen assimilation regulatory protein NtrX. (453 aa)
ntrCNitrogen metabolism transcriptional regulator, NtrC, Fis family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (486 aa)
Meso_1740Cell cycle control histidine kinase CckA; KEGG: mlo:mll0767 sensor kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-4 PAS fold; SMART: PAS. (866 aa)
Meso_1904KEGG: ret:RHE_PE00024 probable two-component sensor histidine kinase/response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif. (651 aa)
Meso_1942Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ppu:PP3761 sensor histidine kinase/response regulator. (1038 aa)
Meso_1944Signal transduction histidine kinase; KEGG: bja:bll2598 two-component response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver HWE histidine kinase PAS fold-3 PAS fold-4; SMART: PAS. (507 aa)
Meso_2032SMART: Response regulator receiver; KEGG: ccr:CC3015 response regulator. (125 aa)
Meso_2142Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mlr2666 transcriptional regulator. (240 aa)
Meso_2212PFAM: response regulator receiver; KEGG: mlo:mlr2815 two-component response regulator. (122 aa)
Meso_2213Cell cycle transcriptional regulator CtrA; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mll2816 two-component transcriptional regulator. (249 aa)
Meso_2221KEGG: nwi:Nwi_1027 response regulator receiver. (138 aa)
Meso_2222Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR response regulator receiver Sigma-70, region 4 type 2; KEGG: sme:SMa1227 FixJ transcriptional activator. (205 aa)
Meso_2731Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver sigma-54 factor, interaction region helix-turn-helix, Fis-type ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: mlo:mll3001 response regulatory protein. (505 aa)
Meso_2750PFAM: response regulator receiver; KEGG: mlo:mlr3041 chemotaxis response regulator. (120 aa)
Meso_2909Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: eba:ebA4468 DNA-binding response regulator OmpR. (268 aa)
Meso_3094PFAM: response regulator receiver; KEGG: mlo:msl3517 response regulator. (121 aa)
Meso_3106Response regulator receiver protein; KEGG: mlo:mlr3696 hypothetical protein. (152 aa)
Meso_3109PFAM: response regulator receiver Sigma-70, region 4 type 2; KEGG: mlo:mlr3700 two-component response regulator. (265 aa)
Meso_3116Two component transcriptional regulator, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mll3716 phosphate regulatory protein, PhoB. (229 aa)
Meso_3424Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mlr4237 two-component response regulator. (227 aa)
Meso_3571Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mll5095 two-component system response regulator. (233 aa)
Meso_3680Multi-sensor hybrid histidine kinase; KEGG: mlo:mlr3215 two-component sensor/response regulator hybrid; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-4; SMART: PAS. (744 aa)
Meso_4041PFAM: response regulator receiver; KEGG: mlo:mlr5308 two-component, response regulator. (188 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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