STRINGSTRING
Meso_3636 Meso_3636 Meso_0126 Meso_0126 Meso_0160 Meso_0160 Meso_0395 Meso_0395 Meso_0567 Meso_0567 Meso_0591 Meso_0591 Meso_1081 Meso_1081 Meso_1591 Meso_1591 Meso_1828 Meso_1828 Meso_1839 Meso_1839 Meso_1843 Meso_1843 Meso_1861 Meso_1861 Meso_1866 Meso_1866 Meso_1933 Meso_1933 Meso_2562 Meso_2562 Meso_2644 Meso_2644 Meso_3322 Meso_3322 Meso_3508 Meso_3508
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_3636PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll7022 sarcosine oxidase, subunit beta. (394 aa)
Meso_0126PFAM: FAD dependent oxidoreductase; KEGG: bme:BMEII0391 sarcosine oxidase beta subunit. (428 aa)
Meso_0160Gamma-glutamylputrescine oxidase; PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll6520 oxidoreductase. (428 aa)
Meso_0395D-amino acid dehydrogenase small subunit; PFAM: FAD dependent oxidoreductase; KEGG: rso:RSc0507 probable amino acid dehydrogenase transmembrane protein. (421 aa)
Meso_0567PFAM: FAD dependent oxidoreductase; KEGG: sil:SPOA0380 hypothetical protein. (435 aa)
Meso_0591TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: atc:AGR_L_1106 sarcosine oxidase beta subunit. (417 aa)
Meso_1081PFAM: FAD dependent oxidoreductase; KEGG: rpb:RPB_1451 FAD dependent oxidoreductase. (367 aa)
Meso_1591PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll0710 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (509 aa)
Meso_1828PFAM: FAD dependent oxidoreductase; KEGG: bcl:ABC0532 glycine/D-amino acid oxidase. (371 aa)
Meso_1839PFAM: FAD dependent oxidoreductase; KEGG: bbr:BB0994 probable FAD dependent oxidoreductase. (376 aa)
Meso_1843PFAM: FAD dependent oxidoreductase; KEGG: rso:RSc0507 probable amino acid dehydrogenase transmembrane protein. (420 aa)
Meso_1861PFAM: FAD dependent oxidoreductase; KEGG: syn:sll1085 glycerol-3-phosphate dehydrogenase. (518 aa)
Meso_1866PFAM: FAD dependent oxidoreductase; KEGG: pfl:PFL_3591 D-amino acid dehydrogenase, small subunit family protein. (434 aa)
Meso_1933PFAM: FAD dependent oxidoreductase; KEGG: bja:bll7193 opine oxidase subunit B. (369 aa)
Meso_2562TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll5793 thiamine biosynthesis oxidoreductase ThiO. (331 aa)
Meso_2644PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc03200 putative amino acid deaminase transmembrane protein. (396 aa)
Meso_3322PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll3980 D-amino-acid dehydrogenase. (435 aa)
Meso_3508PFAM: Rieske [2Fe-2S] region FAD dependent oxidoreductase; KEGG: cef:CE2887 hypothetical protein. (508 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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