STRINGSTRING
Meso_3865 Meso_3865 Meso_1485 Meso_1485 Meso_2220 Meso_2220 Meso_2246 Meso_2246 Meso_2279 Meso_2279 Meso_2575 Meso_2575
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_3865Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding regulatory protein, Crp; KEGG: rsp:RSP_1953 transcriptional regulator, CRP/FNR family. (252 aa)
Meso_1485PFAM: cyclic nucleotide-binding; KEGG: ret:RHE_CH02940 probable transcriptional regulator protein, Fnr/CRP family. (244 aa)
Meso_2220Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding regulatory protein, Crp; KEGG: mlo:mll6578 nitrogen fixation regulation protein fixK. (224 aa)
Meso_2246Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding regulatory protein, Crp; KEGG: bja:blr7084 transcriptional regulatory protein. (233 aa)
Meso_2279Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding regulatory protein, Crp; KEGG: rsp:RSP_2572 CrpK, Fnr-type transcriptional regulator. (258 aa)
Meso_2575Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding regulatory protein, Crp; KEGG: rsp:RSP_3616 transcriptional regulator, Crp-Fnr family. (240 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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