STRINGSTRING
Meso_3857 Meso_3857 Meso_0503 Meso_0503 Meso_2318 Meso_2318
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_3857PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: mlo:mll9606 conjugal transfer protein trbL. (450 aa)
Meso_0503PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: mlo:mll9606 conjugal transfer protein trbL. (449 aa)
Meso_2318PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: mlo:mll9606 conjugal transfer protein trbL. (448 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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