STRINGSTRING
Meso_0608 Meso_0608 Meso_3999 Meso_3999 Meso_3469 Meso_3469 Meso_0660 Meso_0660
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0608PFAM: TadE-like; KEGG: sme:SMa1573 probable CpaE2 pilus assembly protein. (580 aa)
Meso_3999KEGG: sme:SMc04109 putative response regulator protein. (422 aa)
Meso_3469Chromosome segregation ATPase; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mlo:mll4479 chromosome partitioning protein, ParA. (264 aa)
Meso_0660TIGRFAM: exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis; KEGG: mlo:mlr5276 exopolysaccharide polymerization protein, succinoglycan biosynthesis transport protein ExoP. (776 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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