STRINGSTRING
Meso_2406 Meso_2406 Meso_2625 Meso_2625 Meso_1857 Meso_1857 Meso_0036 Meso_0036 Meso_1833 Meso_1833 Meso_0065 Meso_0065 Meso_0401 Meso_0401 Meso_1504 Meso_1504 Meso_3133 Meso_3133 Meso_3729 Meso_3729 Meso_4081 Meso_4081
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_2406PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_4129 binding-protein-dependent transport systems inner membrane component. (284 aa)
Meso_2625PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2833 dipeptide ABC transporter, permease protein. (288 aa)
Meso_1857PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll9134 Dipeptide transport system permease protein. (283 aa)
Meso_0036PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1479 ABC oligopeptide transporter, inner membrane subunit OppC. (379 aa)
Meso_1833PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1631 ABC transporter, permease protein. (299 aa)
Meso_0065PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00788 probable dipeptide transport system permease protein. (311 aa)
Meso_0401PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll9134 Dipeptide transport system permease protein. (283 aa)
Meso_1504PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_321 dipeptide transport system permease protein DppC. (289 aa)
Meso_3133PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_1130 oligopeptide/dipeptide ABC transporter, permease protein. (283 aa)
Meso_3729PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eba:ebA5658 putative peptide ABC transporter permease protein. (304 aa)
Meso_4081PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll5492 peptide ABC transporter, permease protein. (383 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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