STRINGSTRING
Meso_2612 Meso_2612 Meso_2499 Meso_2499 Meso_1929 Meso_1929 Meso_1605 Meso_1605 Meso_1288 Meso_1288 Meso_1093 Meso_1093 Meso_0838 Meso_0838 Meso_0479 Meso_0479 Meso_0266 Meso_0266 Meso_0262 Meso_0262 Meso_4012 Meso_4012 Meso_3982 Meso_3982 Meso_3705 Meso_3705 Meso_3328 Meso_3328 Meso_3114 Meso_3114 Meso_2867 Meso_2867 Meso_2854 Meso_2854 Meso_2846 Meso_2846
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_2612Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: pfl:PFL_2209 hypothetical protein; TC 3.A.1.4.-. (416 aa)
Meso_2499Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB0404 putative branched-chain amino acid binding protein; TC 3.A.1.4.-. (407 aa)
Meso_1929Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI periplasmic binding protein/LacI transcriptional regulator; KEGG: bcl:ABC1167 transcriptional regulator. (347 aa)
Meso_1605Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: atc:AGR_L_2598 sugar ABC transporter, periplasmic sugar-binding protein; TC 3.A.1.2.-. (358 aa)
Meso_1288Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: mlo:mll0086 amino acid binding protein; TC 3.A.1.4.-. (341 aa)
Meso_1093Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI periplasmic binding protein/LacI transcriptional regulator; KEGG: sth:STH770 LacI family transcriptional repressor. (351 aa)
Meso_0838Multiple monosaccharide-binding protein; KEGG: sme:SMb20895 probable sugar uptake ABC transporter periplasmic solute-binding protein precursor. (355 aa)
Meso_0479Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB1151 putative branched-chain amino acid-binding protein; TC 3.A.1.4.-. (390 aa)
Meso_0266Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: sme:SMb20018 putative sugar ABC transporter periplasmic sugar-binding protein ABC transporter; TC 3.A.1.2.-. (341 aa)
Meso_0262Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20014 putative transcriptional regulator protein. (344 aa)
Meso_4012Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: bja:blr0671 hypothetical protein; TC 3.A.1.4.-. (402 aa)
Meso_3982PFAM: basic membrane lipoprotein; KEGG: mlo:mlr3148 membrane lipoprotein. (332 aa)
Meso_3705Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20856 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; TC 3.A.1.2.-. (320 aa)
Meso_3328Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A1746 extracellular ligand-binding receptor; TC 3.A.1.4.-. (366 aa)
Meso_3114Xylose-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_CH03172 xylose ABC transporter, substrate-binding protein. (347 aa)
Meso_2867PFAM: protein of unknown function DUF534; KEGG: bmb:BruAb1_2028 ABC transporter, periplasmic substrate-binding protein, hypothetical. (316 aa)
Meso_2854Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI periplasmic binding protein/LacI transcriptional regulator; KEGG: jan:Jann_1945 transcriptional regulator, LacI family. (391 aa)
Meso_2846PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: bms:BRA0984 transcriptional regulator, putative. (326 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.