STRINGSTRING
Meso_2454 Meso_2454 Meso_1495 Meso_1495 Meso_1981 Meso_1981 Meso_2041 Meso_2041 Meso_0128 Meso_0128 Meso_4073 Meso_4073 Meso_3334 Meso_3334 Meso_2620 Meso_2620 Meso_0483 Meso_0483 Meso_0701 Meso_0701
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_2454PFAM: regulatory protein, TetR; KEGG: fra:Francci3_3148 transcriptional regulator, TetR family. (185 aa)
Meso_1495Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: ret:RHE_CH02745 probable transcriptional regulator protein, TetR family. (219 aa)
Meso_1981PFAM: regulatory protein, TetR; KEGG: mlo:mlr1472 probable transcriptional regulator. (227 aa)
Meso_2041PFAM: regulatory protein, TetR Tetracycline transcriptional regulator YcdC-like-like; KEGG: mlo:mlr1634 probable transcriptional regulator. (211 aa)
Meso_0128PFAM: regulatory protein, TetR; KEGG: rru:Rru_A1794 transcriptional regulator, TetR family. (235 aa)
Meso_4073PFAM: regulatory protein, TetR; KEGG: mlo:mlr4593 transcriptional regulator. (245 aa)
Meso_3334PFAM: regulatory protein, TetR; KEGG: mlo:mlr3838 transcriptional regulator. (202 aa)
Meso_2620Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mlo:mll3646 hypothetical protein. (194 aa)
Meso_0483PFAM: regulatory protein, TetR; KEGG: jan:Jann_2034 transcriptional regulator, TetR family. (225 aa)
Meso_0701PFAM: regulatory protein, TetR; KEGG: tfu:Tfu_1913 putative transcriptional regulator. (261 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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