STRINGSTRING
Meso_3311 Meso_3311 Meso_2974 Meso_2974 Meso_3962 Meso_3962 Meso_3674 Meso_3674
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_3311PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: jan:Jann_2605 ornithine cyclodeaminase. (321 aa)
Meso_2974PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: mlo:mlr1729 ornithine cyclodeaminase. (334 aa)
Meso_3962PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: mlo:mll6776 ornithine cyclodeaminase. (350 aa)
Meso_3674KEGG: mlo:mlr3204 ornithine cyclodeaminase. (97 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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