STRINGSTRING
Meso_3113 Meso_3113 Meso_3323 Meso_3323 Meso_3654 Meso_3654 Meso_3653 Meso_3653 Meso_3324 Meso_3324 Meso_3707 Meso_3707 Meso_0263 Meso_0263 Meso_0264 Meso_0264 Meso_0477 Meso_0477 Meso_0478 Meso_0478 Meso_0840 Meso_0840 Meso_1606 Meso_1606 Meso_1607 Meso_1607 Meso_1691 Meso_1691 Meso_1692 Meso_1692 Meso_2497 Meso_2497 Meso_2498 Meso_2498 Meso_2868 Meso_2868
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_3113PFAM: inner-membrane translocator; KEGG: mlo:mll3711 xylose transport permease protein xylH; Belongs to the binding-protein-dependent transport system permease family. (437 aa)
Meso_3323Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: bja:blr5671 ABC transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (309 aa)
Meso_3654PFAM: inner-membrane translocator; KEGG: mlo:mlr3157 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (323 aa)
Meso_3653Nucleoside ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: sme:SMc04126 putative transport system permease ABC transporter protein. (379 aa)
Meso_3324Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: bja:blr5672 ABC transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (484 aa)
Meso_3707Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: sme:SMb20854 putative sugar uptake ABC transporter permease protein; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family. (335 aa)
Meso_0263Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: sme:SMb20015 putative sugar ABC transporter permease protein ABC transporter; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family. (330 aa)
Meso_0264Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: sme:SMb20016 putative sugar ABC transporter permease protein ABC transporter; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family. (328 aa)
Meso_0477PFAM: inner-membrane translocator; KEGG: dvu:DVU0549 high-affinity branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (346 aa)
Meso_0478Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: dar:Daro_0367 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (290 aa)
Meso_0840Multiple monosaccharide ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: atc:AGR_C_4262 membrane-spanning permease; Belongs to the binding-protein-dependent transport system permease family. (410 aa)
Meso_1606Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_2595 ribose ABC transporter (permease); TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family. (338 aa)
Meso_1607Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_2593 ribose ABC transporter (permease); TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family. (326 aa)
Meso_1691Nucleoside ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: bme:BMEII0701 ribose transport system permease protein RbsC. (304 aa)
Meso_1692PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0655 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (367 aa)
Meso_2497Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: bbr:BB0402 putative branched-chain amino acid transport permease; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (317 aa)
Meso_2498Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: ade:Adeh_2425 ABC branched-chain amino acid transporter, inner membrane subunit; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (290 aa)
Meso_2868PFAM: inner-membrane translocator; KEGG: atc:AGR_C_4842 probable ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (294 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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