STRINGSTRING
Meso_0053 Meso_0053 Meso_0054 Meso_0054 Meso_0055 Meso_0055 Meso_0782 Meso_0782 Meso_0933 Meso_0933 Meso_1053 Meso_1053 Meso_1317 Meso_1317 Meso_1323 Meso_1323 Meso_1868 Meso_1868 Meso_2107 Meso_2107 Meso_2263 Meso_2263 hmgA hmgA Meso_2465 Meso_2465 Meso_2503 Meso_2503 Meso_2504 Meso_2504 Meso_2507 Meso_2507 Meso_2508 Meso_2508 Meso_2652 Meso_2652 Meso_2671 Meso_2671 Meso_2885 Meso_2885 Meso_2887 Meso_2887 hisC hisC Meso_3562 Meso_3562 Meso_3563 Meso_3563 Meso_3565 Meso_3565 Meso_3566 Meso_3566 Meso_3626 Meso_3626 Meso_3766 Meso_3766
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0053TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel; KEGG: pae:PA2470 gentisate 1,2-dioxygenase. (353 aa)
Meso_0054PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bte:BTH_II1389 fumarylacetoacetate hydrolase family protein. (232 aa)
Meso_0055TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase-like; KEGG: bbr:BB3255 putative glutathione-S-transferase. (214 aa)
Meso_0782PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase Xylose isomerase-like TIM barrel; KEGG: ret:RHE_PC00215 putative 4-hydroxyphenylpyruvate dioxygenase protein. (630 aa)
Meso_0933PFAM: aminotransferase, class I and II; KEGG: mlo:mll7737 histidinol-phosphate aminotransferase. (371 aa)
Meso_1053Succinate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_2660 hypothetical protein. (478 aa)
Meso_1317PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mlo:mlr1178 alcohol dehydrogenase. (342 aa)
Meso_1323TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mlo:mll1168 succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (485 aa)
Meso_1868PFAM: iron-containing alcohol dehydrogenase; KEGG: sme:SMc01582 putative alcohol dehydrogenase protein. (381 aa)
Meso_2107PFAM: aminotransferase, class I and II; KEGG: mlo:mlr2541 aspartate aminotransferase A. (400 aa)
Meso_2263PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: bms:BR1061 alcohol dehydrogenase, zinc-containing. (328 aa)
hmgAHomogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. (452 aa)
Meso_2465PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: pae:PA4091 4-hydroxyphenylacetate 3-monooxygenase large chain. (520 aa)
Meso_2503PFAM: HpcH/HpaI aldolase; KEGG: bmb:BruAb2_1093 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, hypothetical. (252 aa)
Meso_2504TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase; KEGG: jan:Jann_3499 2-oxo-hepta-3-ene-1,7-dioic acid hydratase. (266 aa)
Meso_2507TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bms:BRA1161 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (503 aa)
Meso_2508PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bms:BRA1162 5-carboxymethyl-2-hydroxymuconate delta isomerase. (127 aa)
Meso_2652PFAM: aldehyde dehydrogenase; KEGG: cgb:cg0067 succinate-semialdehyde dehydrogenase (NADP+). (500 aa)
Meso_2671PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: sme:SMb20170 probable glutathione-dependent formaldehyde dehydrogenase protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (375 aa)
Meso_2885TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH01745 probable 4-hydroxyphenylpyruvate dioxygenase protein. (369 aa)
Meso_2887PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mlo:mlr8306 hypothetical protein. (338 aa)
hisCTIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: mlo:mll3536 imidazole acetol phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (366 aa)
Meso_3562PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: jan:Jann_2909 5-carboxymethyl-2-hydroxymuconate delta-isomerase. (232 aa)
Meso_3563TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase-like; KEGG: mlo:mlr1135 maleylacetoacetate isomerase. (216 aa)
Meso_3565Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel; KEGG: jan:Jann_2910 cupin 2 protein. (367 aa)
Meso_3566KEGG: cgb:cg3349 hypothetical protein. (203 aa)
Meso_3626PFAM: aminotransferase, class I and II; KEGG: sme:SMc04386 aspartate aminotransferase B protein. (411 aa)
Meso_3766PFAM: aldehyde dehydrogenase; KEGG: pub:SAR11_0766 succinate-semialdehyde dehydrogenase (NAD(P)). (483 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.