STRINGSTRING
Meso_0035 Meso_0035 Meso_0036 Meso_0036 Meso_0037 Meso_0037 Meso_0038 Meso_0038 Meso_0048 Meso_0048 Meso_0069 Meso_0069 Meso_0074 Meso_0074 Meso_0075 Meso_0075 Meso_0076 Meso_0076 Meso_0077 Meso_0077 yidC yidC Meso_0401 Meso_0401 Meso_0402 Meso_0402 Meso_0403 Meso_0403 Meso_0459 Meso_0459 Meso_0460 Meso_0460 Meso_0461 Meso_0461 Meso_0462 Meso_0462 Meso_0463 Meso_0463 Meso_0475 Meso_0475 Meso_0476 Meso_0476 Meso_0477 Meso_0477 Meso_0478 Meso_0478 Meso_0479 Meso_0479 Meso_0500 Meso_0500 Meso_0501 Meso_0501 Meso_0502 Meso_0502 Meso_0503 Meso_0503 Meso_0505 Meso_0505 Meso_0506 Meso_0506 Meso_0507 Meso_0507 Meso_0508 Meso_0508 Meso_0509 Meso_0509 Meso_0560 Meso_0560 Meso_0561 Meso_0561 Meso_0562 Meso_0562 Meso_0563 Meso_0563 Meso_0826 Meso_0826 Meso_0997 Meso_0997 Meso_0998 Meso_0998 Meso_0999 Meso_0999 Meso_1000 Meso_1000 Meso_1001 Meso_1001 Meso_1136 Meso_1136 Meso_1288 Meso_1288 Meso_1310 Meso_1310 Meso_1311 Meso_1311 Meso_1312 Meso_1312 Meso_1313 Meso_1313 Meso_1462 Meso_1462 Meso_1499 Meso_1499 Meso_1504 Meso_1504 Meso_1505 Meso_1505 Meso_1506 Meso_1506 Meso_1510 Meso_1510 hfq hfq Meso_1635 Meso_1635 secY secY Meso_1699 Meso_1699 secF secF yajC yajC secE secE Meso_1832 Meso_1832 Meso_1833 Meso_1833 Meso_1834 Meso_1834 Meso_1835 Meso_1835 Meso_1855 Meso_1855 Meso_1856 Meso_1856 Meso_1857 Meso_1857 Meso_1858 Meso_1858 Meso_1859 Meso_1859 Meso_1862 Meso_1862 Meso_1863 Meso_1863 Meso_1864 Meso_1864 Meso_1865 Meso_1865 potA-2 potA-2 Meso_1936 Meso_1936 Meso_1937 Meso_1937 Meso_1949 Meso_1949 Meso_1950 Meso_1950 Meso_1951 Meso_1951 Meso_1952 Meso_1952 Meso_1953 Meso_1953 Meso_1954 Meso_1954 Meso_2059 Meso_2059 Meso_2060 Meso_2060 Meso_2061 Meso_2061 Meso_2062 Meso_2062 Meso_2311 Meso_2311 Meso_2312 Meso_2312 Meso_2315 Meso_2315 Meso_2316 Meso_2316 Meso_2317 Meso_2317 Meso_2318 Meso_2318 Meso_2320 Meso_2320 Meso_2321 Meso_2321 Meso_2322 Meso_2322 Meso_2323 Meso_2323 Meso_2324 Meso_2324 potA-3 potA-3 Meso_2370 Meso_2370 Meso_2372 Meso_2372 Meso_2375 Meso_2375 Meso_2382 Meso_2382 Meso_2383 Meso_2383 Meso_2384 Meso_2384 Meso_2402 Meso_2402 Meso_2405 Meso_2405 Meso_2406 Meso_2406 Meso_2407 Meso_2407 Meso_2408 Meso_2408 Meso_2414 Meso_2414 Meso_2495 Meso_2495 Meso_2496 Meso_2496 Meso_2498 Meso_2498 Meso_2499 Meso_2499 Meso_2622 Meso_2622 Meso_2623 Meso_2623 Meso_2625 Meso_2625 Meso_2626 Meso_2626 Meso_2633 Meso_2633 Meso_2636 Meso_2636 Meso_2637 Meso_2637 Meso_2650 Meso_2650 Meso_2651 Meso_2651 Meso_2882 Meso_2882 secA secA Meso_3131 Meso_3131 Meso_3132 Meso_3132 Meso_3133 Meso_3133 Meso_3135 Meso_3135 Meso_3136 Meso_3136 Meso_3323 Meso_3323 Meso_3324 Meso_3324 Meso_3325 Meso_3325 Meso_3326 Meso_3326 Meso_3328 Meso_3328 ffh ffh ftsY ftsY secB secB Meso_3632 Meso_3632 Meso_3633 Meso_3633 Meso_3634 Meso_3634 Meso_3635 Meso_3635 Meso_3641 Meso_3641 Meso_3642 Meso_3642 Meso_3643 Meso_3643 Meso_3646 Meso_3646 Meso_3727 Meso_3727 Meso_3728 Meso_3728 Meso_3729 Meso_3729 Meso_3730 Meso_3730 Meso_3737 Meso_3737 Meso_3738 Meso_3738 Meso_3739 Meso_3739 potA-4 potA-4 Meso_3744 Meso_3744 Meso_3745 Meso_3745 Meso_3746 Meso_3746 Meso_3851 Meso_3851 Meso_3852 Meso_3852 Meso_3853 Meso_3853 Meso_3854 Meso_3854 Meso_3855 Meso_3855 Meso_3857 Meso_3857 Meso_3858 Meso_3858 Meso_3859 Meso_3859 Meso_3860 Meso_3860 Meso_4003 Meso_4003
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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co-expression
protein homology
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Meso_0035PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: mlo:mlr7600 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (543 aa)
Meso_0036PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1479 ABC oligopeptide transporter, inner membrane subunit OppC. (379 aa)
Meso_0037PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1480 ABC oligopeptide transporter, inner membrane subunit OppB. (307 aa)
Meso_0038PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA. (533 aa)
Meso_0048TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: rsp:RSP_3667 transcriptional regulator, AraC family with parallel beta-helix repeat. (1946 aa)
Meso_0069PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mll5415 long-chain-fatty-acid-CoA-ligase. (647 aa)
Meso_0074TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: fnu:FN0396 dipeptide-binding protein. (514 aa)
Meso_0075PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO7564 putative oligopeptide ABC transporter integral membrane protein. (316 aa)
Meso_0076Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sil:SPO2552 peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: binding-protein-dependent transport systems inner membrane component ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase. (646 aa)
Meso_0077Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: dra:DR1567 peptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (327 aa)
yidCProtein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (609 aa)
Meso_0401PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll9134 Dipeptide transport system permease protein. (283 aa)
Meso_0402PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atu:Atu3036 ABC transporter, membrane spanning protein [dipeptide]. (344 aa)
Meso_0403TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: atc:AGR_L_3525 putative hemin-binding lipoprotein. (559 aa)
Meso_0459PFAM: extracellular solute-binding protein, family 5; KEGG: pac:PPA1277 ABC transporter, substrate binding protein. (504 aa)
Meso_0460PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lxx:Lxx19250 ABC transporter, permease protein. (304 aa)
Meso_0461PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cdi:DIP1742 putative oligopeptide ABC transport system membrane protein. (285 aa)
Meso_0462PFAM: ABC transporter related; SMART: ATPase; KEGG: lxx:Lxx19230 ABC transporter, ATP-binding protein. (268 aa)
Meso_0463PFAM: ABC transporter related; SMART: ATPase; KEGG: lxx:Lxx19220 oligopeptide porter; Belongs to the ABC transporter superfamily. (249 aa)
Meso_0475Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: smu:SMU.1665 putative branched chain amino acid ABC transporter, ATP-binding protein; TC 3.A.1.4.-. (233 aa)
Meso_0476Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: dps:DP2487 probable high-affinity branched-chain amino acid ABC transporter, ATP-binding protein; TC 3.A.1.4.-. (258 aa)
Meso_0477PFAM: inner-membrane translocator; KEGG: dvu:DVU0549 high-affinity branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (346 aa)
Meso_0478Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: dar:Daro_0367 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (290 aa)
Meso_0479Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB1151 putative branched-chain amino acid-binding protein; TC 3.A.1.4.-. (390 aa)
Meso_0500PFAM: conjugation TrbI-like protein; KEGG: mlo:mll9603 conjugal transfer protein trbI. (399 aa)
Meso_0501PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bja:blr1619 conjugal transfer protein. (326 aa)
Meso_0502PFAM: Conjugal transfer protein; KEGG: mlo:mll9605 conjugal transfer protein trbF. (229 aa)
Meso_0503PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: mlo:mll9606 conjugal transfer protein trbL. (449 aa)
Meso_0505KEGG: mlo:mll9607 conjugal transfer protein trbJ. (253 aa)
Meso_0506ATPase; SMART: ATPase; KEGG: mlo:mll9608 conjugal transfer protein trbE. (812 aa)
Meso_0507KEGG: mlo:mll9611 conjugal transfer protein trbB. (93 aa)
Meso_0508PFAM: Conjugal transfer protein TrbC; KEGG: mlo:mll9610 conjugal transfer protein trbC. (110 aa)
Meso_0509PFAM: type II secretion system protein E; KEGG: mlo:mll9612 conjugal transfer protein trbB. (329 aa)
Meso_0560PFAM: ABC transporter related; SMART: ATPase; KEGG: bja:bll1209 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (542 aa)
Meso_0561PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1882 putative integral membrane transport protein. (284 aa)
Meso_0562PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1650 binding-protein-dependent transport systems inner membrane component. (322 aa)
Meso_0563PFAM: extracellular solute-binding protein, family 5; KEGG: bpa:BPP2435 putative solute-binding transport protein (periplasmic). (536 aa)
Meso_0826PFAM: ABC transporter related; SMART: ATPase; KEGG: atc:AGR_C_3896 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (357 aa)
Meso_0997PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03128 putative transport system permease ABC transporter protein. (293 aa)
Meso_0998PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03127 putative transport system permease ABC transporter protein. (308 aa)
Meso_0999Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sme:SMc03126 putative transport system ATP-binding ABC transporter protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (326 aa)
Meso_1000Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sme:SMc03125 putative transport system ATP-binding ABC transporter protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (351 aa)
Meso_1001TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMc03124 putative periplasmic binding ABC transporter protein. (542 aa)
Meso_11365-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (370 aa)
Meso_1288Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: mlo:mll0086 amino acid binding protein; TC 3.A.1.4.-. (341 aa)
Meso_1310PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mlr1190 probable ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily. (544 aa)
Meso_1311PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr1189 permease protein of oligopeptide ABC transporter. (287 aa)
Meso_1312PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr1187 permease protein of oligopeptide ABC transporter. (318 aa)
Meso_1313PFAM: extracellular solute-binding protein, family 5; KEGG: mlo:mlr1186 dipeptide-binding protein of ABC transporter. (493 aa)
Meso_14623-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; KEGG: mlo:mll0826 phospho-2-dehydro-3-deoxyheptonate aldolase. (458 aa)
Meso_1499TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mlo:mll1393 hypothetical protein. (306 aa)
Meso_1504PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_321 dipeptide transport system permease protein DppC. (289 aa)
Meso_1505PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psb:Psyr_2679 binding-protein-dependent transport systems inner membrane component. (315 aa)
Meso_1506PFAM: extracellular solute-binding protein, family 5; KEGG: psp:PSPPH_2786 ABC-transport protein, solute-binding component. (501 aa)
Meso_1510PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: rpb:RPB_1648 ABC transporter related; Belongs to the ABC transporter superfamily. (539 aa)
hfqRNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (82 aa)
Meso_1635Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (162 aa)
secYProtein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (446 aa)
Meso_1699PFAM: extracellular solute-binding protein, family 5; KEGG: mlo:mlr0514 probable binding protein component of ABC transporter. (611 aa)
secFProtein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (856 aa)
yajCProtein translocase subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. (111 aa)
secEProtein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (67 aa)
Meso_1832PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: sma:SAV3045 putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (606 aa)
Meso_1833PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1631 ABC transporter, permease protein. (299 aa)
Meso_1834PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1632 putative ABC transporter permease. (326 aa)
Meso_1835PFAM: extracellular solute-binding protein, family 5; KEGG: sma:SAV874 putative solute-binding dependent transport lipoprotein. (563 aa)
Meso_1855TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: atc:AGR_L_3525 putative hemin-binding lipoprotein. (540 aa)
Meso_1856PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll9135 Dipeptide transport system permease protein. (337 aa)
Meso_1857PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll9134 Dipeptide transport system permease protein. (283 aa)
Meso_1858KEGG: rpb:RPB_0234 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (321 aa)
Meso_1859KEGG: chy:CHY_2360 peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (328 aa)
Meso_1862PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP0414 polyamine ABC transporter, permease protein. (272 aa)
Meso_1863PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1234 motC. (285 aa)
Meso_1864PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: bja:bll3241 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (361 aa)
Meso_1865PFAM: extracellular solute-binding protein, family 1; KEGG: bja:bll6825 ABC transporter substrate-binding protein. (352 aa)
potA-2Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (357 aa)
Meso_1936KEGG: pae:PA0222 putative spermidine/putrescine transport system substrate-binding protein. (359 aa)
Meso_1937PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll6253 ABC transporter permease protein. (606 aa)
Meso_1949PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMa1438 putative ABC transporter, periplasmic solute-binding protein. (506 aa)
Meso_1950PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMa1438 putative ABC transporter, periplasmic solute-binding protein. (506 aa)
Meso_1951PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1437 probable ABC transporter permease. (305 aa)
Meso_1952PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20142 putative oligopeptide ABC transporter permease protein. (317 aa)
Meso_1953Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sma:SAV3146 putative peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (336 aa)
Meso_1954PFAM: ABC transporter related; SMART: ATPase; KEGG: sme:SMb20141 putative oligopeptide ABC transporter ATP-binding protein. (283 aa)
Meso_2059Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: mlo:mll1656 ATP-binding protein of dipeptide ABC transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (694 aa)
Meso_2060PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1657 permease protein of dipeptide ABC transporter. (385 aa)
Meso_2061PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1659 permease protein of oligopeptide ABC transporter. (345 aa)
Meso_2062TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: mlo:mll1660 dipeptide binding protein component of ABC transporter. (550 aa)
Meso_2311Transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR Autoinducer-binding Sigma-70, region 4 type 2; KEGG: rpb:RPB_3321 transcriptional regulator, LuxR family. (265 aa)
Meso_2312PFAM: autoinducer synthesis protein; KEGG: rpb:RPB_3320 autoinducer synthesis protein. (200 aa)
Meso_2315PFAM: conjugation TrbI-like protein; KEGG: mlo:mll9603 conjugal transfer protein trbI. (396 aa)
Meso_2316PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bja:blr1619 conjugal transfer protein. (318 aa)
Meso_2317PFAM: Conjugal transfer protein; KEGG: nwi:Nwi_2093 conjugal transfer protein. (229 aa)
Meso_2318PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: mlo:mll9606 conjugal transfer protein trbL. (448 aa)
Meso_2320KEGG: mlo:mll9607 conjugal transfer protein trbJ. (253 aa)
Meso_2321ATPase; SMART: ATPase; KEGG: mlo:mll9608 conjugal transfer protein trbE. (811 aa)
Meso_2322KEGG: mlo:mll9611 conjugal transfer protein trbB. (93 aa)
Meso_2323PFAM: Conjugal transfer protein TrbC; KEGG: mlo:mll9610 conjugal transfer protein trbC. (110 aa)
Meso_2324PFAM: type II secretion system protein E; KEGG: mlo:mll9612 conjugal transfer protein trbB. (327 aa)
potA-3Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (373 aa)
Meso_2370PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3546 ABC transporter permease protein. (274 aa)
Meso_2372TIGRFAM: Twin-arginine translocation pathway signal; KEGG: ret:RHE_PC00028 probable polyamine ABC transporter, substrate-binding protein. (364 aa)
Meso_2375TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: bha:BH1016 oligopeptide transport system substrate-binding protein. (514 aa)
Meso_2382PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0397 dipeptide transport system permease protein dppB. (314 aa)
Meso_2383PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll2866 ABC transporter permease protein. (278 aa)
Meso_2384KEGG: pst:PSPTO2573 peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase. (346 aa)
Meso_2402PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: atc:AGR_L_318 hypothetical ABC transporter ATP-binding protein in bcr 5'region. (615 aa)
Meso_2405PFAM: beta-lactamase-like; KEGG: sso:SSO2940 hypothetical protein. (237 aa)
Meso_2406PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_4129 binding-protein-dependent transport systems inner membrane component. (284 aa)
Meso_2407PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH1423 oligopeptide ABC transporter permease protein. (306 aa)
Meso_2408PFAM: extracellular solute-binding protein, family 5; KEGG: sth:STH1422 oligopeptide ABC transporter substrate-binding protein. (505 aa)
Meso_2414TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: rsp:RSP_3667 transcriptional regulator, AraC family with parallel beta-helix repeat. (1898 aa)
Meso_2495Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: dde:Dde_0262 ATPase; TC 3.A.1.4.-. (239 aa)
Meso_2496Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: rpa:RPA1751 putative branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-. (243 aa)
Meso_2498Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: ade:Adeh_2425 ABC branched-chain amino acid transporter, inner membrane subunit; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (290 aa)
Meso_2499Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB0404 putative branched-chain amino acid binding protein; TC 3.A.1.4.-. (407 aa)
Meso_2622PFAM: extracellular solute-binding protein, family 5; KEGG: sil:SPO2835 dipeptide ABC transporter, periplasmic dipeptide-binding protein. (517 aa)
Meso_2623KEGG: sil:SPO2831 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (328 aa)
Meso_2625PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2833 dipeptide ABC transporter, permease protein. (288 aa)
Meso_2626PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2834 dipeptide ABC trasnporter, permease protein. (318 aa)
Meso_2633TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: sil:SPO2835 dipeptide ABC transporter, periplasmic dipeptide-binding protein. (515 aa)
Meso_2636PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2833 dipeptide ABC transporter, permease protein. (283 aa)
Meso_2637PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3030 ABC peptide/opine transporter, inner membrane subunit. (315 aa)
Meso_2650PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0030 oligopeptide transport system permease protein. (290 aa)
Meso_2651PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: mlo:mlr6287 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (593 aa)
Meso_2882PFAM: AMP-dependent synthetase and ligase; KEGG: sme:SMb20650 putative long-chain fatty-acid-CoA ligase protein. (514 aa)
secAProtein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (910 aa)
Meso_3131PFAM: extracellular solute-binding protein, family 5; KEGG: gsu:GSU1433 peptide ABC transporter, periplasmic peptide-binding protein. (508 aa)
Meso_3132PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC1241 oligopeptide ABC transporter permease. (326 aa)
Meso_3133PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_1130 oligopeptide/dipeptide ABC transporter, permease protein. (283 aa)
Meso_3135Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bja:bll0990 peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (325 aa)
Meso_3136Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bja:bll0989 peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (321 aa)
Meso_3323Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: bja:blr5671 ABC transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (309 aa)
Meso_3324Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: bja:blr5672 ABC transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (484 aa)
Meso_3325Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: atc:AGR_C_4398 ATPase; TC 3.A.1.4.-. (354 aa)
Meso_3326General L-amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mll3974 ATP-binding component of ABC transporter. (244 aa)
Meso_3328Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A1746 extracellular ligand-binding receptor; TC 3.A.1.4.-. (366 aa)
ffhSignal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...] (522 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (500 aa)
secBProtein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. (168 aa)
Meso_3632KEGG: mlo:mll7347 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (691 aa)
Meso_3633PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH130 oligopeptide ABC transporter permease protein. (288 aa)
Meso_3634PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0300 ABC transporter, permease. (313 aa)
Meso_3635PFAM: extracellular solute-binding protein, family 5; KEGG: ret:RHE_PC00130 probable peptide ABC transporter, substrate-binding protein. (515 aa)
Meso_3641PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3343 ABC transporter permease protein. (272 aa)
Meso_3642PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3342 ABC transporter permease protein. (313 aa)
Meso_3643TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: rpb:RPB_1226 extracellular solute-binding protein, family 5. (533 aa)
Meso_3646PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: bja:bll6709 probable ATP-binding protein; Belongs to the ABC transporter superfamily. (609 aa)
Meso_3727KEGG: eba:ebA5654 ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (665 aa)
Meso_3728PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eba:ebA5655 putative peptide ABC transporter permease protein. (319 aa)
Meso_3729PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eba:ebA5658 putative peptide ABC transporter permease protein. (304 aa)
Meso_3730PFAM: extracellular solute-binding protein, family 5; KEGG: eba:ebA5660 probable ABC transporter substrate binding protein. (528 aa)
Meso_3737PFAM: extracellular solute-binding protein, family 5; KEGG: reu:Reut_A3006 extracellular solute-binding protein, family 5. (517 aa)
Meso_3738KEGG: tfu:Tfu_1630 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (680 aa)
Meso_3739PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3659 oligopeptide ABC transporter permease. (292 aa)
potA-4Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (370 aa)
Meso_3744TIGRFAM: Twin-arginine translocation pathway signal; KEGG: bld:BLi00397 putative spermidine/putrescine-binding periplasmic protein 2 precursor; RBL01741. (345 aa)
Meso_3745PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3517 ABC polyamine/opine transporter, inner membrane subunit. (299 aa)
Meso_3746PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi00400 putative spermidineputrescine ABC transporter permease protein; RBL01738. (268 aa)
Meso_3851PFAM: type II secretion system protein E; KEGG: rpa:RPA4124 conjugal transfer protein trbB. (327 aa)
Meso_3852PFAM: Conjugal transfer protein TrbC; KEGG: nar:Saro_0317 conjugal transfer protein TrbC. (125 aa)
Meso_3853KEGG: rru:Rru_A0806 conjugal transfer protein. (93 aa)
Meso_3854ATPase; SMART: ATPase; KEGG: bja:bll8285 probable conjugal transfer protein. (830 aa)
Meso_3855KEGG: mlo:mll9607 conjugal transfer protein trbJ. (253 aa)
Meso_3857PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: mlo:mll9606 conjugal transfer protein trbL. (450 aa)
Meso_3858PFAM: Conjugal transfer protein; KEGG: nwi:Nwi_2093 conjugal transfer protein. (229 aa)
Meso_3859PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bja:blr1619 conjugal transfer protein. (328 aa)
Meso_3860PFAM: conjugation TrbI-like protein; KEGG: mlo:mll9603 conjugal transfer protein trbI. (388 aa)
Meso_4003KEGG: ret:RHE_CH02709 zinc uptake transcriptional regulator protein, Fur family; Belongs to the Fur family. (144 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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