STRINGSTRING
Meso_0067 Meso_0067 Meso_0266 Meso_0266 Meso_0284 Meso_0284 Meso_0303 Meso_0303 Meso_0304 Meso_0304 Meso_0305 Meso_0305 Meso_0306 Meso_0306 Meso_0597 Meso_0597 Meso_0598 Meso_0598 Meso_0599 Meso_0599 Meso_0600 Meso_0600 Meso_0601 Meso_0601 Meso_1605 Meso_1605 Meso_1943 Meso_1943 Meso_2212 Meso_2212 Meso_3188 Meso_3188 Meso_3705 Meso_3705
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0067PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMc00786 probable periplasmic dipeptide-binding protein. (542 aa)
Meso_0266Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: sme:SMb20018 putative sugar ABC transporter periplasmic sugar-binding protein ABC transporter; TC 3.A.1.2.-. (341 aa)
Meso_0284PFAM: OmpA/MotB; KEGG: mlo:mlr2931 flagellar motor protein MotB. (452 aa)
Meso_0303KEGG: mlo:mll2905 flagellar motor protein MotA. (295 aa)
Meso_0304PFAM: surface presentation of antigens (SPOA) protein; KEGG: mlo:mll2904 flagellar motor switch protein FliM. (311 aa)
Meso_0305Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (121 aa)
Meso_0306PFAM: flagellar motor switch protein FliG; KEGG: mlo:mll2901 flagellar motor switch protein FliG. (335 aa)
Meso_0597PFAM: MCP methyltransferase, CheR-type Methyltransferase type 12; KEGG: sme:SMa1552 putative methyltransferase - chemotaxis. (481 aa)
Meso_0598PFAM: CheW-like protein; KEGG: sme:SMa1554 putative purine-binding chemotaxis protein CheW. (211 aa)
Meso_0599PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: sme:SMa1556 putative methyl-accepting chemotaxis protein. (539 aa)
Meso_0600CheA signal transduction histidine kinase; PFAM: response regulator receiver CheW-like protein ATP-binding region, ATPase-like Hpt; KEGG: sme:SMa1558 putative histidine kinase, chemotaxis. (706 aa)
Meso_0601Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (344 aa)
Meso_1605Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: atc:AGR_L_2598 sugar ABC transporter, periplasmic sugar-binding protein; TC 3.A.1.2.-. (358 aa)
Meso_1943PFAM: MCP methyltransferase, CheR-type; KEGG: xcb:XC_3058 chemotaxis protein. (286 aa)
Meso_2212PFAM: response regulator receiver; KEGG: mlo:mlr2815 two-component response regulator. (122 aa)
Meso_3188PFAM: OmpA/MotB; KEGG: mlo:mlr3926 similar to flagellar motor protein MotB. (343 aa)
Meso_3705Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20856 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; TC 3.A.1.2.-. (320 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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