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| | Krad_0003 | TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rha:RHA1_ro03668 phosphogluconate dehydrogenase (decarboxylating). (304 aa) |
| | Krad_0032 | Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV7156 LacI-family transcriptional regulator. (329 aa) |
| | Krad_0033 | KEGG: art:Arth_3946 hypothetical protein. (132 aa) |
| | Krad_0034 | KEGG: tfu:Tfu_0160 hypothetical protein. (375 aa) |
| | zwf | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (474 aa) |
| | Krad_0143 | TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: nca:Noca_4438 phosphoglucomutase, alpha-D-glucose phosphate-specific. (551 aa) |
| | Krad_0165 | TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: sma:SAV7451 putative ribose-phosphate pyrophosphokinase. (312 aa) |
| | Krad_0194 | TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: oih:OB2818 C4-dicarboxylate transport system C4-dicarboxylate-binding protein. (349 aa) |
| | Krad_0195 | PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: cef:CE2240 putative C4-dicarboxylate permease small protein. (192 aa) |
| | Krad_0196 | TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: oih:OB2816 C4-dicarboxylate transport system permease large protein. (437 aa) |
| | kduI | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (279 aa) |
| | Krad_0199 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sco:SCO3478 dehydrogenase. (326 aa) |
| | Krad_0200 | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sco:SCO3476 putative short-chain dehydrogenase. (251 aa) |
| | Krad_0201 | TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: pac:PPA0371 KHG/KDPG aldolase. (223 aa) |
| | Krad_0202 | PFAM: PfkB domain protein; KEGG: pac:PPA0370 carbohydrate kinase, PfkB family. (359 aa) |
| | nhaA1 | Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (434 aa) |
| | Krad_0384 | PFAM: regulatory protein LacI. (339 aa) |
| | Krad_0414 | PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator. (333 aa) |
| | acsA | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (654 aa) |
| | Krad_0532 | Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: atc:AGR_L_1864 biotin carboxylase protein A2. (575 aa) |
| | Krad_0549 | Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV4978 putative LacI-family transcriptional regulator. (340 aa) |
| | Krad_0582 | PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: reh:H16_A2758 altronate dehydratase. (533 aa) |
| | Krad_0583 | PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: ace:Acel_0905 mannitol dehydrogenase, C-terminal domain. (510 aa) |
| | Krad_0587 | PFAM: Glucuronate isomerase; KEGG: rsp:RSP_0488 uronate isomerase. (473 aa) |
| | Krad_0597 | TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: dra:DR1910 thermoresistant gluconokinase. (170 aa) |
| | Krad_0657 | PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: art:Arth_2742 electron transfer flavoprotein beta-subunit. (271 aa) |
| | Krad_0658 | PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: art:Arth_2741 electron transfer flavoprotein, alpha subunit. (320 aa) |
| | Krad_0664 | KEGG: aau:AAur_3002 hypothetical protein. (153 aa) |
| | Krad_0665 | PFAM: MaoC domain protein dehydratase; KEGG: sco:SCO4637 hypothetical protein. (138 aa) |
| | Krad_0666 | PFAM: major facilitator superfamily MFS_1; KEGG: nca:Noca_1769 major facilitator superfamily MFS_1. (409 aa) |
| | Krad_0766 | PFAM: FAD linked oxidase domain protein; KEGG: fal:FRAAL3861 putative glycolate oxidoreductase (partial match). (441 aa) |
| | Krad_0767 | 1-aminocyclopropane-1-carboxylate deaminase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sma:SAV1520 putative 1-aminocyclopropane-1-carboxylate deaminase. (322 aa) |
| | Krad_0774 | PFAM: Phytanoyl-CoA dioxygenase; KEGG: sme:SMb21341 hypothetical protein. (285 aa) |
| | Krad_0775 | Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO1066 LacI-family transcriptional regulator. (341 aa) |
| | Krad_0776 | KEGG: sco:SCO7299 stress-inducible protein. (284 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (409 aa) |
| | Krad_0857 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (699 aa) |
| | Krad_0865 | PFAM: Catalase domain protein; KEGG: nfa:nfa55390 putative catalase; Belongs to the catalase family. (551 aa) |
| | Krad_0889 | KEGG: aau:AAur_0891 hypothetical protein. (261 aa) |
| | gpmA | Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (250 aa) |
| | Krad_0971 | PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: msm:MSMEG_5143 HTH-type transcriptional regulator DegA. (350 aa) |
| | rbsK | PfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (322 aa) |
| | Krad_1038 | Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO1066 LacI-family transcriptional regulator. (351 aa) |
| | Krad_1039 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nfa:nfa35710 putative quinone oxidoreductase. (321 aa) |
| | prs | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (325 aa) |
| | eno | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (431 aa) |
| | Krad_1095 | TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mkm:Mkms_0358 methylmalonate-semialdehyde dehydrogenase. (479 aa) |
| | fumC | Fumarate lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (471 aa) |
| | Krad_1118 | PFAM: PfkB domain protein; KEGG: rha:RHA1_ro02811 fructokinase. (316 aa) |
| | Krad_1119 | TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein; KEGG: sco:SCO5047 fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase. (346 aa) |
| | Krad_1140 | TIGRFAM: citrate synthase I; PFAM: Citrate synthase; KEGG: mpa:MAP0829 citrate synthase; Belongs to the citrate synthase family. (441 aa) |
| | zwf-2 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (480 aa) |
| | Krad_1228 | TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; catalytic domain of components of various dehydrogenase complexes; Transketolase central region; KEGG: art:Arth_2645 2-oxoglutarate dehydrogenase, E1 subunit. (1287 aa) |
| | Krad_1332 | PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: art:Arth_3918 transcriptional regulator, LacI family. (315 aa) |
| | Krad_1333 | PFAM: oxidoreductase domain protein; aldo/keto reductase; Oxidoreductase domain; KEGG: atc:AGR_L_3327 hypothetical protein. (665 aa) |
| | Krad_1410 | PFAM: protein of unknown function UPF0027; KEGG: art:Arth_3119 protein of unknown function UPF0027. (389 aa) |
| | Krad_1424 | TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: msm:MSMEG_0581 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa) |
| | Krad_1425 | PFAM: aldehyde dehydrogenase; KEGG: aau:AAur_1331 putative succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (488 aa) |
| | pgi | PFAM: phosphoglucose isomerase (PGI); KEGG: pac:PPA2131 glucose-6-phosphate isomerase; Belongs to the GPI family. (561 aa) |
| | Krad_1524 | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (490 aa) |
| | Krad_1536 | PFAM: PfkB domain protein; KEGG: tfu:Tfu_0696 putative 6-phosphofructokinase : 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. (319 aa) |
| | Krad_1539 | TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: aau:AAur_0293 phosphocarrier protein HPr. (90 aa) |
| | Krad_1540 | Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (557 aa) |
| | Krad_1541 | PFAM: Carboxylesterase type B; KEGG: sco:SCO0321 carboxylesterase; Belongs to the type-B carboxylesterase/lipase family. (520 aa) |
| | Krad_1543 | PFAM: FAD dependent oxidoreductase; KEGG: rha:RHA1_ro02919 flavin binding monooxygenase. (489 aa) |
| | Krad_1566 | TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: art:Arth_1644 aconitate hydratase 1. (949 aa) |
| | Krad_1916 | PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: msm:MSMEG_6791 3-hydroxybutyryl-CoA dehydrogenase. (325 aa) |
| | Krad_1917 | PFAM: triosephosphate isomerase; KEGG: sco:SCO0578 triosephosphate isomerase. (264 aa) |
| | Krad_1918 | Ribose 5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase; KEGG: msm:MSMEG_3272 ribose 5-phosphate isomerase. (167 aa) |
| | Krad_1919 | PFAM: Dak kinase; Dak phosphatase; KEGG: sme:SMb20767 putative dihydroxyacetone (glycerone) kinase protein. (569 aa) |
| | Krad_1920 | PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20768 hypothetical protein. (338 aa) |
| | Krad_2086 | PFAM: carbohydrate kinase FGGY; KEGG: rxy:Rxyl_0833 carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. (506 aa) |
| | Krad_2128 | PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: msm:MSMEG_2909 starvation-sensing protein RspA. (402 aa) |
| | Krad_2129 | PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: ace:Acel_0905 mannitol dehydrogenase, C-terminal domain. (482 aa) |
| | Krad_2130 | PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: msm:MSMEG_2912 inner membrane metabolite transport protein YdfJ. (464 aa) |
| | Krad_2131 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_2914 L-idonate 5-dehydrogenase. (349 aa) |
| | Krad_2132 | PFAM: PfkB domain protein; KEGG: ace:Acel_1214 PfkB domain protein. (344 aa) |
| | Krad_2133 | TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: vfi:VF0090 2-dehydro-3-deoxyphosphogluconate aldolase. (200 aa) |
| | Krad_2157 | TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; KEGG: aau:AAur_1469 putative fructose/tagatose bisphosphate aldolase. (281 aa) |
| | Krad_2227 | TIGRFAM: malate synthase A; PFAM: malate synthase; KEGG: tfu:Tfu_0819 malate synthase; Belongs to the malate synthase family. (526 aa) |
| | Krad_2434 | Pyruvate, water dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: mka:MK0252 phosphoenolpyruvate synthase/pyruvate phosphate dikinase. (434 aa) |
| | Krad_2483 | TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein; KEGG: nfa:nfa48000 putative fructose-1,6-bisphosphatase. (350 aa) |
| | Krad_2495 | KEGG: ppd:Ppro_3841 plasmid encoded RepA protein. (103 aa) |
| | Krad_2497 | Alanine racemase; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pol:Bpro_5109 transcriptional regulator, LacI family. (338 aa) |
| | Krad_2499 | PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sco:SCO1010 integral membrane transport protein. (454 aa) |
| | Krad_2500 | PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msm:MSMEG_2013 oxidoreductase, short chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (257 aa) |
| | Krad_2529 | PFAM: regulatory protein LacI; KEGG: mpa:MAP4300 hypothetical protein. (323 aa) |
| | Krad_2583 | Hypothetical protein. (163 aa) |
| | Krad_2584 | Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO1066 LacI-family transcriptional regulator. (376 aa) |
| | Krad_2609 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sma:SAV492 enoyl-CoA hydratase. (277 aa) |
| | Krad_2750 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; KEGG: hch:HCH_01003 probable mercuric reductase. (502 aa) |
| | Krad_2883 | TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: art:Arth_0490 3-oxoacid CoA-transferase, B subunit. (236 aa) |
| | Krad_2922 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (697 aa) |
| | tal | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. (373 aa) |
| | zwf-3 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (513 aa) |
| | Krad_2925 | TIGRFAM: OpcA protein; KEGG: art:Arth_2093 oxppcycle protein. (406 aa) |
| | pgl | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (249 aa) |
| | tpiA | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (261 aa) |
| | pgk | PFAM: phosphoglycerate kinase; KEGG: nca:Noca_2531 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (412 aa) |
| | Krad_2931 | TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: art:Arth_2087 glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (334 aa) |
| | Krad_2947 | PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: art:Arth_0219 transcriptional regulator, LacI family. (359 aa) |
| | Krad_2959 | TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; KEGG: art:Arth_1693 pyruvate kinase; Belongs to the pyruvate kinase family. (505 aa) |
| | Krad_2980 | PFAM: ribulose-phosphate 3-epimerase; KEGG: aau:AAur_1824 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (221 aa) |
| | Krad_3234 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. (343 aa) |
| | Krad_3241 | PFAM: AMP-dependent synthetase and ligase; KEGG: sma:SAV6069 putative acyl-CoA synthetase, long-chain-fatty-acid:CoA ligase. (599 aa) |
| | Krad_3278 | TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: nca:Noca_2304 dihydrolipoamide dehydrogenase. (477 aa) |
| | Krad_3279 | TIGRFAM: 2-oxoglutarate dehydrogenase E2 component; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: aau:AAur_1755 putative 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. (618 aa) |
| | lipB | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (214 aa) |
| | lipA | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (333 aa) |
| | Krad_3319 | PFAM: ROK family protein; KEGG: tfu:Tfu_1811 polyphosphate glucokinase/transcriptional regulator. (268 aa) |
| | Krad_3340 | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (918 aa) |
| | ppc | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (954 aa) |
| | Krad_3424 | Hypothetical protein. (65 aa) |
| | Krad_3488 | TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: tfu:Tfu_2856 acetate--CoA ligase. (656 aa) |
| | Krad_3502 | TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: tfu:Tfu_1903 thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (403 aa) |
| | Krad_3503 | PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: sco:SCO6026 fatty acid oxidation complex alpha-subunit. (681 aa) |
| | Krad_3505 | PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rxy:Rxyl_0375 acyl-CoA dehydrogenase-like protein. (393 aa) |
| | Krad_3506 | PFAM: AMP-dependent synthetase and ligase; KEGG: sma:SAV377 putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase. (505 aa) |
| | Krad_3519 | PFAM: glycerate kinase; KEGG: aau:AAur_3509 glycerate kinase; Belongs to the glycerate kinase type-1 family. (397 aa) |
| | Krad_3522 | Ribose 5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase; KEGG: tfu:Tfu_2202 ribose/galactose isomerase:ribose 5-phosphate isomerase, actinobacteria. (162 aa) |
| | pckG | Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (625 aa) |
| | Krad_3568 | PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bad:BAD_0150 LacI-type transcriptional regulator. (349 aa) |
| | Krad_3572 | PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rxy:Rxyl_0945 transcriptional regulator, LacI family. (348 aa) |
| | Krad_3595 | PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV630 putative LacI-family transcriptional regulator. (356 aa) |
| | Krad_3596 | KEGG: fra:Francci3_0107 hypothetical protein. (495 aa) |
| | mqo | TIGRFAM: malate--quinone oxidoreductase; PFAM: FAD dependent oxidoreductase; Malate:quinone-oxidoreductase; KEGG: art:Arth_2549 malate--quinone oxidoreductase. (493 aa) |
| | Krad_3734 | PFAM: ROK family protein; KEGG: nca:Noca_4485 ROK family protein. (331 aa) |
| | Krad_3870 | TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; KEGG: tfu:Tfu_0016 mannose-6-phosphate isomerase, type I. (402 aa) |
| | Krad_3895 | PFAM: carbohydrate kinase FGGY; KEGG: gka:GK1941 gluconokinase; Belongs to the FGGY kinase family. (524 aa) |
| | Krad_3908 | TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: sco:SCO4927 biotin apo-protein ligase. (270 aa) |
| | Krad_3912 | Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: sma:SAV3337 putative acyl-CoA carboxylase, alpha subunit. (634 aa) |
| | Krad_3918 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: nca:Noca_3517 pyridine nucleotide-disulphide oxidoreductase dimerisation region. (479 aa) |
| | Krad_3919 | KEGG: sma:SAV3341 hypothetical protein. (150 aa) |
| | Krad_3952 | TIGRFAM: Succinate dehydrogenase cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: art:Arth_1131 succinate dehydrogenase, cytochrome b subunit. (139 aa) |
| | Krad_3953 | Succinate dehydrogenase hydrophobic anchor subunit-like; KEGG: art:Arth_1130 putative succinate dehydrogenase membrane subunit. (169 aa) |
| | Krad_3954 | TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: art:Arth_1129 succinate dehydrogenase, flavoprotein subunit. (610 aa) |
| | Krad_3955 | TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: aau:AAur_1244 succinate dehydrogenase, iron-sulfur subunit. (281 aa) |
| | Krad_3978 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rxy:Rxyl_1765 pyridine nucleotide-disulphide oxidoreductase dimerisation region. (428 aa) |
| | Krad_3988 | TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: tfu:Tfu_2568 isocitrate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (404 aa) |
| | Krad_3989 | PFAM: carboxyl transferase; KEGG: sco:SCO4926 propionyl-CoA carboxylase complex B subunit. (534 aa) |
| | sucD | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (299 aa) |
| | sucC | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (411 aa) |
| | Krad_4014 | Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rha:RHA1_ro04275 transcriptional regulator, LacI family. (330 aa) |
| | Krad_4028 | TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: aau:AAur_2140 putative acetyl-coa acetyltransferase (thiolase); Belongs to the thiolase-like superfamily. Thiolase family. (398 aa) |
| | Krad_4030 | PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; KEGG: tfu:Tfu_2239 hypothetical protein. (660 aa) |
| | Krad_4031 | PFAM: biotin/lipoate A/B protein ligase; KEGG: sco:SCO6423 putative lipoate-protein ligase. (349 aa) |
| | xylB | TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: ace:Acel_2065 xylulokinase. (465 aa) |
| | Krad_4083 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: art:Arth_0665 pyridine nucleotide-disulphide oxidoreductase dimerisation region. (478 aa) |
| | Krad_4124 | Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (340 aa) |
| | Krad_4149 | PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rle:RL4378 putative LacI family transcriptional regulator. (333 aa) |
| | Krad_4155 | PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rha:RHA1_ro01362 transcriptional regulator, LacI family. (335 aa) |
| | deoC | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (225 aa) |
| | Krad_4226 | Ribose 5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase; KEGG: msm:MSMEG_3272 ribose 5-phosphate isomerase. (167 aa) |
| | Krad_4229 | KEGG: tfu:Tfu_2315 putative secreted protein. (340 aa) |
| | pfkA | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily. (461 aa) |
| | Krad_4286 | PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sco:SCO3815 putative dihydrolipoamide acyltransferase component. (450 aa) |
| | Krad_4287 | PFAM: Transketolase central region; Transketolase domain protein; KEGG: ace:Acel_0032 transketolase, central region. (327 aa) |
| | Krad_4288 | PFAM: dehydrogenase E1 component; KEGG: nca:Noca_4509 pyruvate dehydrogenase (acetyl-transferring). (390 aa) |
| | Krad_4349 | PFAM: aldo/keto reductase; KEGG: nfa:nfa6720 putative oxidoreductase. (275 aa) |
| | Krad_4403 | PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: art:Arth_0504 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein. (406 aa) |
