STRINGSTRING
Krad_0022 Krad_0022 Krad_0256 Krad_0256 Krad_0257 Krad_0257 Krad_0258 Krad_0258 Krad_0259 Krad_0259 Krad_0260 Krad_0260 Krad_0261 Krad_0261 Krad_0262 Krad_0262 Krad_0359 Krad_0359 Krad_0555 Krad_0555 Krad_0562 Krad_0562 Krad_0611 Krad_0611 Krad_1027 Krad_1027 Krad_1150 Krad_1150 Krad_1151 Krad_1151 Krad_1152 Krad_1152 Krad_1153 Krad_1153 tatB tatB Krad_1645 Krad_1645 Krad_1646 Krad_1646 Krad_1788 Krad_1788 selO selO Krad_1842 Krad_1842 Krad_1843 Krad_1843 Krad_1855 Krad_1855 Krad_1856 Krad_1856 Krad_1857 Krad_1857 arc arc Krad_1871 Krad_1871 pup pup prcB prcB prcA prcA pafA pafA Krad_1876 Krad_1876 Krad_1877 Krad_1877 Krad_1881 Krad_1881 tatA tatA tatC tatC Krad_1885 Krad_1885 Krad_2696 Krad_2696 Krad_2860 Krad_2860 Krad_2861 Krad_2861 Krad_2862 Krad_2862 Krad_2884 Krad_2884 Krad_2885 Krad_2885 Krad_2886 Krad_2886 Krad_2887 Krad_2887 Krad_3499 Krad_3499 Krad_3500 Krad_3500 Krad_3622 Krad_3622 Krad_4111 Krad_4111 Krad_4179 Krad_4179 Krad_4224 Krad_4224 Krad_4245 Krad_4245 Krad_4412 Krad_4412
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Krad_0022Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
Krad_0256Hypothetical protein. (89 aa)
Krad_0257KEGG: noc:Noc_1844 hypothetical protein. (332 aa)
Krad_0258KEGG: art:Arth_0684 hypothetical protein. (116 aa)
Krad_0259KEGG: ace:Acel_2102 hypothetical protein. (204 aa)
Krad_0260PFAM: phosphoesterase PA-phosphatase related; KEGG: mva:Mvan_5447 phosphoesterase, PA-phosphatase related. (287 aa)
Krad_0261PFAM: aldo/keto reductase; KEGG: sma:SAV4117 oxidoreductase. (314 aa)
Krad_0262PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msm:MSMEG_2026 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (274 aa)
Krad_0359PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; LGFP repeat protein; Belongs to the peptidase S8 family. (846 aa)
Krad_0555Sulphate transporter; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sco:SCO3276 integral membrane transporter. (497 aa)
Krad_0562KEGG: fal:FRAAL6247 hypothetical protein; putative membrane protein. (488 aa)
Krad_0611PFAM: histone deacetylase superfamily; KEGG: art:Arth_3345 histone deacetylase superfamily. (394 aa)
Krad_1027PFAM: carbonic anhydrase; KEGG: tfu:Tfu_2132 carbonic anhydrase, putative. (179 aa)
Krad_1150PFAM: O-methyltransferase family 3; Methyltransferase type 11; KEGG: art:Arth_2796 O-methyltransferase, family 3. (217 aa)
Krad_1151RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sco:SCO5147 putative ECF-subfamily sigma factor. (232 aa)
Krad_1152KEGG: fal:FRAAL6090 hypothetical protein. (200 aa)
Krad_1153PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: sco:SCO5149 putative protease. (436 aa)
tatBTwin-arginine translocation protein, TatB subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (128 aa)
Krad_1645Hypothetical protein. (191 aa)
Krad_1646Hypothetical protein; KEGG: sco:SCO5397 large Ala/Glu-rich protein. (717 aa)
Krad_1788PFAM: protein of unknown function DUF81; KEGG: aau:AAur_1554 putative integral membrane protein. (279 aa)
selOProtein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (486 aa)
Krad_1842PFAM: protein of unknown function DUF75; KEGG: sma:SAV6650 hypothetical protein. (294 aa)
Krad_1843TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nca:Noca_2632 HAD-superfamily hydrolase, subfamily IA, variant 3. (241 aa)
Krad_1855KEGG: sma:SAV6672 putative RecB family exonuclease. (294 aa)
Krad_1856PFAM: peptidase M50; KEGG: tfu:Tfu_1815 hypothetical protein; Belongs to the peptidase M50B family. (377 aa)
Krad_1857PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: aau:AAur_2173 hypothetical protein. (363 aa)
arcAAA ATPase central domain protein; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. (578 aa)
Krad_1871PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: tfu:Tfu_1796 putative proteasome component. (541 aa)
pupProtein of unknown function DUF797; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. (65 aa)
prcB20S proteasome A and B subunits; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. (302 aa)
prcA20S proteasome A and B subunits; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. (237 aa)
pafAProtein of unknown function DUF245 domain protein; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine. (453 aa)
Krad_1876PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pac:PPA1384 putative peptidyl-prolyl cis-trans isomerase. (340 aa)
Krad_1877PFAM: peptidylprolyl isomerase FKBP-type; KEGG: art:Arth_2180 peptidylprolyl isomerase, FKBP-type. (125 aa)
Krad_1881KEGG: ace:Acel_1202 hypothetical protein. (112 aa)
tatASec-independent translocation protein mttA/Hcf106; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (98 aa)
tatCSec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (285 aa)
Krad_1885PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; DSH domain protein; SMART: DEAD-like helicases; KEGG: sco:SCO1631 putative helicase. (931 aa)
Krad_2696PFAM: carbonic anhydrase; KEGG: gvi:glr0945 carbonate dehydratase. (272 aa)
Krad_2860Hypothetical protein. (186 aa)
Krad_2861Hypothetical protein; KEGG: mtp:Mthe_0684 carbonate dehydratase. (437 aa)
Krad_2862PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: art:Arth_1867 AAA ATPase, central domain protein. (379 aa)
Krad_2884PFAM: GCN5-related N-acetyltransferase; KEGG: sma:SAV2967 hypothetical protein. (247 aa)
Krad_2885TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: sco:SCO0590 putative oxidoreductase. (309 aa)
Krad_2886PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: sco:SCO2171 secreted protease. (391 aa)
Krad_2887PFAM: major facilitator superfamily MFS_1; KEGG: art:Arth_3779 major facilitator superfamily MFS_1. (423 aa)
Krad_3499PFAM: glycosyl transferase family 2; KEGG: nca:Noca_3497 glycosyl transferase, family 2. (497 aa)
Krad_3500KEGG: mva:Mvan_4123 formate/nitrite family of transporters-like protein. (276 aa)
Krad_3622PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bad:BAD_0057 possible DO serine protease. (486 aa)
Krad_4111PFAM: cutinase; KEGG: mul:MUL_0856 cutinase precursor, Cut3. (294 aa)
Krad_4179PFAM: Ankyrin; KEGG: sco:SCO1414 ankyrin-like protein. (132 aa)
Krad_4224KEGG: mkm:Mkms_5414 conserved hypothetical protein. (147 aa)
Krad_4245PFAM: Ankyrin; KEGG: sco:SCO1414 ankyrin-like protein. (167 aa)
Krad_4412KEGG: rha:RHA1_ro02493 hypothetical protein. (267 aa)
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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