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Krad_1030 Krad_1030 Krad_1031 Krad_1031 Krad_1032 Krad_1032 Krad_1033 Krad_1033 Krad_1544 Krad_1544 Krad_1545 Krad_1545
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Krad_1030PFAM: Endoribonuclease L-PSP; KEGG: lxx:Lxx00630 protein synthesis inhibitor. (135 aa)
Krad_1031KEGG: rha:RHA1_ro02460 possible D-amino acid deaminase. (447 aa)
Krad_1032N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase domain protein; Amidohydrolase 3; KEGG: msm:MSMEG_3787 D-aminoacylase. (545 aa)
Krad_1033PFAM: transcriptional regulator PadR family protein; KEGG: fal:FRAAL1119 putative PadR-like family transcriptional regulator. (219 aa)
Krad_1544TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cef:CE0106 hypothetical protein; Belongs to the peptidase M20A family. (447 aa)
Krad_1545KEGG: fal:FRAAL0072 hypothetical protein. (301 aa)
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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