Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Krad_0123 | Krad_0187 | Krad_0123 | Krad_0187 | PFAM: protein of unknown function DUF344; KEGG: fal:FRAAL4412 conserved hypothetical protein; putative P-loop containing nucleotide triphosphate hydrolase domain. | PFAM: protein of unknown function DUF344; KEGG: msm:MSMEG_0891 polyphosphate kinase 2. | 0.902 |
| Krad_0123 | ppk | Krad_0123 | Krad_0877 | PFAM: protein of unknown function DUF344; KEGG: fal:FRAAL4412 conserved hypothetical protein; putative P-loop containing nucleotide triphosphate hydrolase domain. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.945 |
| Krad_0187 | Krad_0123 | Krad_0187 | Krad_0123 | PFAM: protein of unknown function DUF344; KEGG: msm:MSMEG_0891 polyphosphate kinase 2. | PFAM: protein of unknown function DUF344; KEGG: fal:FRAAL4412 conserved hypothetical protein; putative P-loop containing nucleotide triphosphate hydrolase domain. | 0.902 |
| Krad_0187 | ppk | Krad_0187 | Krad_0877 | PFAM: protein of unknown function DUF344; KEGG: msm:MSMEG_0891 polyphosphate kinase 2. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.945 |
| Krad_0854 | thiL | Krad_0854 | Krad_1366 | TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rle:pRL110441 putative phosphomethylpyrimidine kinase. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.751 |
| Krad_2792 | Krad_2992 | Krad_2792 | Krad_2992 | KEGG: lxx:Lxx21810 hypothetical protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.538 |
| Krad_2992 | Krad_2792 | Krad_2992 | Krad_2792 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | KEGG: lxx:Lxx21810 hypothetical protein. | 0.538 |
| Krad_2992 | adk | Krad_2992 | Krad_0709 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.788 |
| Krad_2992 | cmk | Krad_2992 | Krad_3117 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: art:Arth_1536 cytidylate kinase. | 0.615 |
| Krad_2992 | ndk | Krad_2992 | Krad_3490 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.942 |
| Krad_2992 | pyrH | Krad_2992 | Krad_1417 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.743 |
| adk | Krad_2992 | Krad_0709 | Krad_2992 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.788 |
| adk | ndk | Krad_0709 | Krad_3490 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.923 |
| adk | pyrH | Krad_0709 | Krad_1417 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.645 |
| adk | thiL | Krad_0709 | Krad_1366 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.900 |
| cmk | Krad_2992 | Krad_3117 | Krad_2992 | TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: art:Arth_1536 cytidylate kinase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.615 |
| cmk | ndk | Krad_3117 | Krad_3490 | TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: art:Arth_1536 cytidylate kinase. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.934 |
| cmk | pyrH | Krad_3117 | Krad_1417 | TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: art:Arth_1536 cytidylate kinase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.619 |
| cmk | tmk | Krad_3117 | Krad_0489 | TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: art:Arth_1536 cytidylate kinase. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.449 |
| ndk | Krad_2992 | Krad_3490 | Krad_2992 | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.942 |
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