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Krad_0085 Krad_0085 Krad_0673 Krad_0673 Krad_1477 Krad_1477 Krad_1916 Krad_1916 Krad_2081 Krad_2081 Krad_2472 Krad_2472 hisC hisC Krad_4089 Krad_4089 Krad_4109 Krad_4109 pat pat Krad_4413 Krad_4413
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Krad_0085PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rha:RHA1_ro02017 probable L-amino-acid oxidase. (536 aa)
Krad_0673Aminotransferase class I and II; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: sco:SCO4645 aspartate aminotransferase. (415 aa)
Krad_1477PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sma:SAV1776 putative 4-hydroxyphenylpyruvate dioxygenase. (596 aa)
Krad_1916PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: msm:MSMEG_6791 3-hydroxybutyryl-CoA dehydrogenase. (325 aa)
Krad_2081PFAM: Amidase; KEGG: fal:FRAAL4260 putative glutamyl-tRNA(Gln) amidotransferase, subunit A; Belongs to the amidase family. (546 aa)
Krad_2472PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: msm:MSMEG_2035 amine oxidase [flavin-containing] B. (459 aa)
hisCTIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: nca:Noca_3044 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (378 aa)
Krad_4089PFAM: Amidase; KEGG: mxa:MXAN_3566 amidase. (497 aa)
Krad_4109PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro01812 possible ferredoxin. (112 aa)
patHistidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (376 aa)
Krad_4413PFAM: Amidase; KEGG: mxa:MXAN_3566 amidase. (559 aa)
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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