STRINGSTRING
Krad_2506 Krad_2506 Krad_2904 Krad_2904 Krad_2908 Krad_2908 Krad_3346 Krad_3346 Krad_3908 Krad_3908 Krad_4027 Krad_4027 Krad_4254 Krad_4254 Krad_4344 Krad_4344
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Krad_2506PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gvi:gll4203 probable dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)
Krad_2904TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: art:Arth_2119 3-oxoacyl-(acyl-carrier-protein) reductase. (243 aa)
Krad_2908PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sco:SCO1831 putative oxidoreductase. (264 aa)
Krad_3346Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (420 aa)
Krad_3908TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: sco:SCO4927 biotin apo-protein ligase. (270 aa)
Krad_4027PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rha:RHA1_ro05199 3-oxoacyl-[acyl-carrier-protein] reductase. (446 aa)
Krad_4254PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: art:Arth_3056 short-chain dehydrogenase/reductase SDR. (247 aa)
Krad_4344PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: tfu:Tfu_0340 trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (760 aa)
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.